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3.0.0

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•Last updated Aug 14, 2026

Add support for Nanopore data
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Some parameter changes will break current practice.

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#1033

· erikrikarddaniel opened

on Jul 29, 2026

Separate maxEE for paired-end forward and reverse reads

#1037

· naurasd opened

on Jul 31, 2026

Fix Savont with pooled sample inferrence and extend testing

nf-core/ampliseq

#1049

· d4straub opened

on Aug 10, 2026