compile.sh

# Auxiliary function used to handle submodules
gitSubmodule() {
    if [ ! -d "configuration/myResources/Latex" ]; then
        git submodule update --init --recursive
    else
        git submodule update --remote configuration/myResources
    fi
}

# Auxiliary function used to compile dissertation
compileLatex() {
     pdflatex $1.tex    # Initial compile to generate .aux, .glo, .acn files
     biber $1           # Run biber for bibliography
     makeglossaries $1  # Process glossaries with makeglossaries
     pdflatex $1.tex    # Second compile to update references
     pdflatex $1.tex    # Final compile to ensure everything is in place

     # Cleanup intermediate files
     rm $1.aux $1.bbl $1.bcf $1.blg $1.glo* $1.gls* $1.ist $1.log $1.out $1.run.xml \
       $1.slg $1.slo $1.sls $1.tdo $1.toc $1.glg* $1.lot $1.lof $1.dvi
}

cleanCopilation() {
    # Remove everything except .tex and .pdf
   find . -maxdepth 1 -type f \
        -name "$1.*" ! -name "$1.tex" ! -name "$1.pdf" -delete
}
#gitSubmodule
compileLatex main