combiroc/_pkgdown.yml at master · minghao2016/combiroc · GitHub

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template:
  params:
    bootswatch: cosmo

navbar:
  structure:
    left:  [home, articles, reference, news]
    right: [github]
  components:
    home:
      icon: fa-home fa-lg
      href: index.html
    articles:
      text: Vignette
      href: articles/combiroc_standard.html
    reference:
      text: Reference
      href: reference/index.html
    news:
      text: Changelog
      href: news/index.html
    github:
      icon: fab fa-github fa-lg
      href: https://github.com/ingmbioinfo/combiroc

reference:
- title: "Built-in demo datasets"
  desc: "Demonstrative datasets to be used as examples (AIH proteomics datasets)"
  contents:
  - demo_data
  - demo_unclassified_data

- title: "Input and format data"
  desc: "Functions to read-in and correctly format datasets"
  contents:
  - load_data
  - load_uclassified_data
  - combiroc_long

- title: "Exploratory functions"
  desc: "Functions to explore the data before actual analysis"
  contents:
  - markers_distribution
  - single_markers_statistics

- title: "Analysis functions"
  desc: "Functions for the standard analytical workflow"
  contents:
  - combi
  - se_sp
  - ranked_combs
  - roc_reports
  - classify

- title: "Ancillary"
  desc: "Additional functions to explore results"
  contents:
  - show_markers
  - combs_with