diff --git a/Dockerfile b/Dockerfile index 9e9a3086..4fdb69db 100644 --- a/Dockerfile +++ b/Dockerfile @@ -3,7 +3,7 @@ FROM bioconductor/bioconductor_docker:${BIOC_VERSION} COPY . /opt/pkg # Install book package -RUN Rscript -e 'repos <- BiocManager::repositories() ; remotes::install_local(path = "/opt/pkg/", repos=repos, dependencies=TRUE, build_vignettes=FALSE, upgrade=TRUE) ; sessioninfo::session_info(installed.packages()[,"Package"], include_base = TRUE)' +RUN Rscript -e 'repos <- BiocManager::repositories(); options(repos = repos); devtools::install("/opt/pkg", dependencies = TRUE, build_vignettes = FALSE); sessioninfo::session_info(installed.packages()[,"Package"], include_base = TRUE)' ## Build/install using same approach than BBS RUN R CMD INSTALL /opt/pkg