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C homopolymer length too long on both haplotypes #712

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@jzook

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Issue location in assembly

chr4_PATERNAL:2481290-2481291

Description of the issue

C homopolymer is two bases too long based on clean element HG002 reads, though it is a bit noisy. Submitting separate issue for maternal haplotype, which seems to be 1bp too long #711

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    small_errorThis error spans fewer than 50 bases in the assemblyv1.1This is an issue/error in the hg002v1.1 assembly

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