Missing command options in micromamba

[JohanMabille]

The following command options in conda / mamba1 are missing in micromamba/mamba 2:

TODO: list missing command options and track them here.

• list command not handling pip packages (cf. pip packages support with list #3565)
• export command not handling pip packages (cf. [micromamba] micromamba env export does not show packages installed with pip #2008)

[anutosh491]

More commands found in conda/mamba1 missing in micromamba/mamba2

Not shown explicitly through --help

• compare
• deactivate
  cf. fix: Add deactivate command to the help message #4350
• init
• uninstall
• package (Create low-level conda packages. (EXPERIMENTAL))

Others

• doctor (Display a health report for your environment)
• export (Export a given environment)
• notices (Retrieve latest channel notifications)
• rename
• content-trust (Signing and verification tools for Conda)

Differences in flags/utilities for common commands (provided by conda but not by mamba 2)

1. Create

• --clone ENV (Create a new environment as a copy of an existing local env)
• --show-channel-urls (Show channel urls)
• -C, --use-index-cache ( Use cache of channel index files, even if it has expired)
• --dev ( Use sys.executable -m conda in wrapper scripts instead of CONDA_EXE. This is mainly for use during tests where we test new conda sources against old Python versions.)
• --no-lock (Disable locking)

2. Install

• --revision REVISION (Revert to the specified REVISION)
  cf. Create packages diff between the current state and a revision #3911
  cf. feat: add option revision to install command #3966
• --dev
• --solver (Choose which solver backend to use)
• --no-lock
• --show-channel-urls

3. Update (some common to create & install)

• --use-local (Use locally built packages)
• --force-reinstall (Ensure that any user-requested package is uninstalled and reinstalled)
  Consider mamba update --all does not fix packages with missing bin, lib, include, share, etc. files #3860
• --update-deps (Update dependencies that have available update)
• --no-update-deps (Do not update or change already-installed dependencies)
• --update-specs (Update based on provided specifications)
• --clobber (Allow clobbering of overlapping file paths within package)

4. list (some commonly listed above)

• --reverse (List installed packages in reverse order)
  cf. feat: add reverse flag to list command #3705
• -c, --canonical (Output canonical names of packages only)
  cf. feat: add canonical flag to list command #3777
• --explicit (List explicitly all installed conda packages with URL)
  cf. feat: add explicit flag to list command #3760
• --md5 (Add MD5 hashsum when using --explicit)
  cf. feat: add md5 flag to list command #3773
• --sha256 (Add SHA256 hashsum when using --explicit)
  cf. feat: add sha256 flag to list command #3885
• -e, --export (Output explicit, machine-readable requirement strings instead of human-readable lists of packages)
  cf. feat: add export flag to list command #3780
• -r, --revisions (List the revision history)
  cf. feat: add revisions flag to list command #3800
• --no-pip (Do not include pip-only installed packages)
  cf. Add no-pip flag to list command #3696
• --auth (In explicit mode, leave authentication details in package URLs)

5. remove

• --keep-env (Used with --all, delete all packages but keep the environment)
• -c CHANNEL
• --use-local
• --override-channels
• --repodata-fn REPODATA_FNS
• --features (Remove features (instead of packages))
• --force-remove, --force
• some mentioned above like (--use-index-cache, networking options like ssl-verify, --no-pin, --solver etc)

6. info

• --base (Display base environment path)
  cf. feat: add base flag to info command #3779
• -e, --envs (List all known conda environments)
  cf. feat: add envs flag to info command #3837
• -s, --system (List environment variables)
• --unsafe-channels (Display list of channels with tokens exposed)

7. remove

• -c [TEMPFILES ...], --tempfiles [TEMPFILES ...]. (Remove temporary files that could not be deleted earlier due to being in-use)
• -l, --logfiles (Remove log files)

8. run

• --no-capture-output, --live-stream (Don't capture stdout/stderr)
• --debug-wrapper-scripts ( When this is set, where implemented, the shell wrapper scriptswill use the echo command to print debugging information to stderr)

9. search

• -i, --info (Provide detailed information about each package)
• --skip-flexible-search (Do not perform flexible search if initial search fails)
• some common ones as pointed above.

10. activate

• --no-stack Do not stack the environment

11. init

• --system (Initialize conda for all users on the system.)

NOTE: For the common commands conda displays an basic example/docstring for how to use each command.