I am currently running the SGVFinder2 pipeline to identify variable SVs. However, I am only getting normalized values for the vSVs, rather than the continuous values representing the coverage of variable SVs (which were provided in SGVFinder version 1).
May I ask how I can obtain these continuous coverage values using SGVFinder2?
I am currently running the SGVFinder2 pipeline to identify variable SVs. However, I am only getting normalized values for the vSVs, rather than the continuous values representing the coverage of variable SVs (which were provided in SGVFinder version 1).
May I ask how I can obtain these continuous coverage values using SGVFinder2?