LLM-PathwayCurator/mkdocs.yml at main · kenflab/LLM-PathwayCurator · GitHub

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# mkdocs.yml
site_name: LLM-PathwayCurator
site_description: "Enrichment interpretations → audited, decision-grade pathway claims."
repo_name: kenflab/LLM-PathwayCurator
repo_url: https://github.com/kenflab/LLM-PathwayCurator
edit_uri: edit/main/docs/

theme:
  name: material
  logo: assets/LLM-PathwayCurator_logo.png
  features:
    - navigation.instant
    - navigation.tracking
    - navigation.top
    - content.code.copy
    - toc.integrate

nav:
  - Home: index.md
  - Getting started: getting-started.md
  - Concepts: concepts.md
  - User guide: user-guide.md
  - Tutorials: tutorials.md
  - API reference: api-reference.md

plugins:
  - search
  - mkdocstrings:
      handlers:
        python:
          # docs/ lives under repo root; keep paths relative to repo root.
          paths: ["src"]
          options:
            show_source: false
            show_root_heading: true
            docstring_style: numpy

            # --- look & readability ---
            show_object_full_path: false
            show_root_toc_entry: false
            merge_init_into_class: true
            show_signature: true
            separate_signature: true
            signature_crossrefs: true
            heading_level: 2
            docstring_section_style: list

markdown_extensions:
  - admonition
  - pymdownx.details
  - pymdownx.superfences
  - toc:
      permalink: true

extra_css:
  - stylesheets/extra.css