From 0edaa915014835814f0236e9cc41502108809825 Mon Sep 17 00:00:00 2001
From: Emmanuel Benazera <beniz@droidnik.fr>
Date: Wed, 1 Oct 2014 10:27:29 +0200
Subject: [PATCH 1/3] moving to eigen3 + adding debug symbol

---
 Makefile | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/Makefile b/Makefile
index c5616f8..b4fb2b4 100644
--- a/Makefile
+++ b/Makefile
@@ -1,5 +1,5 @@
 CXX = g++
-CXXFLAGS = -O2 -Wall -I/usr/include/eigen2
+CXXFLAGS = -O4 -Wall -I/usr/include/eigen3 -g
 LDFLAGS =
 OBJ = nca.o
 

From 14e6ca7fd3830207861e09f448b2412494642f00 Mon Sep 17 00:00:00 2001
From: Emmanuel Benazera <beniz@droidnik.fr>
Date: Wed, 1 Oct 2014 10:27:46 +0200
Subject: [PATCH 2/3] fixed crash when reading empty line in dataset

---
 nca.cpp | 32 ++++++++++++++++----------------
 1 file changed, 16 insertions(+), 16 deletions(-)

diff --git a/nca.cpp b/nca.cpp
index b1c699c..1e42ab4 100644
--- a/nca.cpp
+++ b/nca.cpp
@@ -46,22 +46,22 @@ int main(int argc, char *argv[]) {
 
     int size = -1;
     while(std::getline(csv_file, s)) {
-        if(size < 0) size = csv_size(s);
-
-        CsvSplitter tok(s);
-        Eigen::VectorXd x(size);
-        int i = 0, pos = 0;
-        for(CsvSplitter::const_iterator t = tok.begin(); t != tok.end(); ++t) {
-            if(pos == label_index) {
-                label.push_back(*t);
-            } else {
-                x[i] = std::atof(t->c_str());
-                ++i;
-            }
-            ++pos;
-        }
-
-        input.push_back(x);
+      if(size < 0) size = csv_size(s);
+      if (s.empty())
+	continue;
+      CsvSplitter tok(s);
+      Eigen::VectorXd x(size);
+      int i = 0, pos = 0;
+      for(CsvSplitter::const_iterator t = tok.begin(); t != tok.end(); ++t) {
+	if(pos == label_index) {
+	  label.push_back(*t);
+	} else {
+	  x[i] = std::atof(t->c_str());
+	  ++i;
+	}
+	++pos;
+      }
+      input.push_back(x);
     }
 
     // Test

From 555e1f7b28018fa48696c805a5e4d85294848955 Mon Sep 17 00:00:00 2001
From: Emmanuel Benazera <beniz@droidnik.fr>
Date: Wed, 1 Oct 2014 10:42:30 +0200
Subject: [PATCH 3/3] fixed makefile + activated openmp

---
 Makefile | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/Makefile b/Makefile
index b4fb2b4..981cdf9 100644
--- a/Makefile
+++ b/Makefile
@@ -1,10 +1,10 @@
 CXX = g++
-CXXFLAGS = -O4 -Wall -I/usr/include/eigen3 -g
+CXXFLAGS = -O4 -Wall -I/usr/include/eigen3 -g -fopenmp
 LDFLAGS =
 OBJ = nca.o
 
 nca: $(OBJ)
-	$(CXX) -o $@ $^ $(CXX_FLAGS) $(LDFLAGS)
+	$(CXX) -o $@ $^ $(CXXFLAGS) $(LDFLAGS)
 
 clean:
 	rm -f $(OBJ) nca