Need to update the reference in the README and elsewhere as:
Ferrari, I., Battistella, M., Vincenti, F. et al. CIA: unveiling cellular identities with cluster-independent annotation in single-cell RNA sequencing data for comprehensive cell type characterization and exploration. BMC Bioinformatics 27, 38 (2026). DOI: 10.1186/s12859-025-06320-z <https://doi.org/10.1186/s12859-025-06320-z>_.
Need to update the reference in the README and elsewhere as:
Ferrari, I., Battistella, M., Vincenti, F. et al. CIA: unveiling cellular identities with cluster-independent annotation in single-cell RNA sequencing data for comprehensive cell type characterization and exploration. BMC Bioinformatics 27, 38 (2026). DOI:
10.1186/s12859-025-06320-z <https://doi.org/10.1186/s12859-025-06320-z>_.