grouped_distributions axes lables

[Elisa-Arsuffi]

Axis lables in grouped_distributions plot must be swapped.

[federicomarini]

Hi @Elisa-Arsuffi , I am not too sure I can follow - you mean that "Signatures" should go on the y axis and whatever other covariate (e.g. "celltype" in the vignette) goes on the x?

I might need @ivanferrari95 to reply to this properly

[Elisa-Arsuffi]

I'll explain better, it is not a problem of position but of lables, at the moment signatures appear on the y axis and celltypes on the x, but their labels are swapped, on the y the label says "celltype" and on the x the label it says "Signatures".
I hope it's more clear like this

[federicomarini]

Ok, I think it was not too clear to guess from the vignette where we do have an example of that function being called

... but since the "celltype" and the "Signatures" have the same levels of factors, it was a tough one to spot.

[federicomarini]

Should be addressed in the branch/PR #6 - https://github.com/ingmbioinfo/CIA_R/tree/update_gmt

If you can give it a quick spin to make sure it is behaving correctly, be our guest 😉