Hello,
Thanks for the great tool!
A clustered heatmap can be very useful for detecting problematic samples in a cohort.
This is easily implemented by adding order='hclust', hclust.method='ward.D2' to the corrplot function in BAMixChecker.py:813.
It would be great to have an option, say -c --cluster to let the user decide whether a clustered heatmap should be produced.
Thanks,
Andrej
Hello,
Thanks for the great tool!
A clustered heatmap can be very useful for detecting problematic samples in a cohort.
This is easily implemented by adding
order='hclust', hclust.method='ward.D2'to thecorrplotfunction inBAMixChecker.py:813.It would be great to have an option, say
-c --clusterto let the user decide whether a clustered heatmap should be produced.Thanks,
Andrej