build_srr, build_M1, and fit_mod use different style conventions for selecting the estimation procedure, parameterization (e.g. suitMode, srr_fun, M1_model), and priors.
I think if env_indices are not NA, they can be automatically included in estimation?
I think the different parameterizations can be renamed following their base process: suitability, mortality, growth, recruitment?
Priors if not NA, can automatically be applied? But how to deal with M1 vs M prior....
proj_mean_rec and srr_pred_fun can be combined and srr_meanyr removed.
build_srr,build_M1, andfit_moduse different style conventions for selecting the estimation procedure, parameterization (e.g. suitMode, srr_fun, M1_model), and priors.I think if
env_indicesare not NA, they can be automatically included in estimation?I think the different parameterizations can be renamed following their base process: suitability, mortality, growth, recruitment?
Priors if not NA, can automatically be applied? But how to deal with M1 vs M prior....
proj_mean_recandsrr_pred_funcan be combined andsrr_meanyrremoved.