LARIS/pyproject.toml at master · genecell/LARIS · GitHub

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[build-system]
requires = ["maturin>=1.0,<2.0"]
build-backend = "maturin"

[project]
name = "laris"
version = "0.13.0"
description = "LARIS enables accurate and efficient ligand and receptor interaction analysis in spatial transcriptomics"
readme = "README.md"
requires-python = ">=3.9"
license = "BSD-3-clause"
authors = [
    { name = "Min Dai", email = "dai@broadinstitute.org"},
    { name = "Tivadar Török", email = "ttorok@broadinstitute.org" },
    { name = "Dawei Sun", email = "dsun@broadinstitute.org" }
]
maintainers = [
    { name = "Min Dai", email = "dai@broadinstitute.org" },
    { name = "Tivadar Török", email = "ttorok@broadinstitute.org" },
    { name = "Vallari Shende", email = "vshende@broadinstitute.org" }
]
keywords = ["spatial-transcriptomics", "ligand-receptor", "cell-communication", "bioinformatics", "single-cell"]
classifiers = [
    "Development Status :: 4 - Beta",
    "Intended Audience :: Science/Research",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Topic :: Scientific/Engineering :: Visualization",
]
dependencies = [
    "scanpy>=1.9.1",
    "anndata>=0.8.0",
    "cosg>=1.0.3,!=1.1.0,!=1.1.1",
    "numpy>=1.20.0",
    "pandas>=1.3.0",
    "scipy>=1.7.0",
    "scikit-learn>=0.24.0",
    "networkx>=2.8",
    "matplotlib>=3.4.0",
    "seaborn>=0.11.0",
    "tqdm",
    "statsmodels>=0.13.2",
    "typing-extensions",

]

# https://docs.pypi.org/project_metadata/#project-urls
[project.urls]
Documentation = "https://genecell.github.io/LARIS/"
Source = "https://github.com/genecell/LARIS"
Homepage = "https://genecell.github.io/LARIS/"
"Bug Tracker" = "https://github.com/genecell/LARIS/issues"

[project.optional-dependencies]
dev = [
    "pre-commit",
    "pytest>=7.0",
]
cytome = [
    "cytome>=0.2.3,<1.0",
]

[tool.hatch.build]
exclude = [
  "docs",
  "docs/",
  ".github",
  ".git",
  "*.pdf",
  "*.html"
]

[tool.hatch.build.targets.wheel]
packages = [ "laris" ]


[tool.maturin]
features = ["pyo3/extension-module"]
module-name = "laris._laris"
python-source = "."