feat: add support for rsfitsio as backend #824
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| # this is based on the wheel workflow in GalSim, but adapted to our needs | |
| name: build wheels and sdist | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| ref: | |
| description: 'The git ref to build wheels for. This will trigger a pypi upload.' | |
| default: '' | |
| required: false | |
| type: string | |
| cibw_skip: | |
| description: 'Python versions to skip when building wheels.' | |
| default: 'cp36* cp37* pp* cp38* cp39*' | |
| required: false | |
| type: string | |
| pull_request: null | |
| release: | |
| types: | |
| - published | |
| concurrency: | |
| group: pypi | |
| cancel-in-progress: false | |
| env: | |
| PYVER: '3.11' | |
| CIBW_SKIP_VAL: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.cibw_skip || 'cp36* cp37* pp* cp38* cp39*' }} | |
| jobs: | |
| linux-manylinux: | |
| name: linux-manylinux | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: free disk space | |
| uses: endersonmenezes/free-disk-space@v3 | |
| with: | |
| remove_android: true | |
| remove_dotnet: true | |
| remove_haskell: true | |
| rm_cmd: "rmz" | |
| - uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0 | |
| with: | |
| ref: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.ref || '' }} | |
| fetch-depth: 0 | |
| fetch-tags: true | |
| - uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0 | |
| with: | |
| python-version: '${{ env.PYVER }}' | |
| - name: build wheels | |
| uses: pypa/cibuildwheel@294735312765b09d24a2fbec22660ce817587d55 # v4.1.0 | |
| env: | |
| CIBW_BUILD: "*manylinux*" | |
| CIBW_ARCHS: auto64 | |
| CIBW_SKIP: ${{ env.CIBW_SKIP_VAL }} | |
| # I think yum might always work here. But leave all options available. | |
| CIBW_BEFORE_ALL: yum install -y bzip2-devel || apt-get install libbz2-dev || apk add --upgrade bzip2-dev | |
| - name: test wheel for python ${{ env.PYVER }} | |
| run: | | |
| pystr='${{ env.PYVER }}' | |
| pystr=${pystr//./} | |
| whl=$(ls ./wheelhouse/*cp${pystr}*.whl) | |
| python -m pip install --upgrade pip | |
| pip install "${whl}[dev]" | |
| pytest --pyargs fitsio --parallel-threads 4 --iterations 4 | |
| - uses: actions/upload-artifact@v7 | |
| with: | |
| name: whl-linux | |
| path: ./wheelhouse/*.whl | |
| linux-musl: | |
| name: linux-musl | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: free disk space | |
| uses: endersonmenezes/free-disk-space@v3 | |
| with: | |
| remove_android: true | |
| remove_dotnet: true | |
| remove_haskell: true | |
| rm_cmd: "rmz" | |
| - uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0 | |
| with: | |
| ref: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.ref || '' }} | |
| fetch-depth: 0 | |
| fetch-tags: true | |
| - uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0 | |
| with: | |
| python-version: '${{ env.PYVER }}' | |
| - name: build wheels | |
| uses: pypa/cibuildwheel@294735312765b09d24a2fbec22660ce817587d55 # v4.1.0 | |
| env: | |
| CIBW_BUILD: "*musllinux*" | |
| CIBW_ARCHS: auto64 | |
| CIBW_SKIP: ${{ env.CIBW_SKIP_VAL }} | |
| # I think musl always uses apk, but keep all options available. | |
| CIBW_BEFORE_ALL: yum install -y bzip2-devel || apt-get install libbz2-dev || apk add --upgrade bzip2-dev | |
| CIBW_ENVIRONMENT: 'CFLAGS="-Wno-implicit-function-declaration -Wno-int-conversion"' | |
| - uses: jirutka/setup-alpine@v1 | |
| with: | |
| packages: "bzip2-dev python3 py3-pip py3-numpy" | |
| - name: test wheel for python | |
| shell: alpine.sh {0} | |
| run: | | |
| python --version | |
| pystr=$(python --version | cut -d' ' -f 2 | cut -d'.' -f 1)$(python --version | cut -d' ' -f 2 | cut -d'.' -f 2) | |
| whl=$(ls ./wheelhouse/*cp${pystr}-musl*.whl) | |
| mkdir test-venv | |
| python3 -m venv test-venv | |
| . test-venv/bin/activate | |
| python -m pip install --upgrade pip | |
| pip install "${whl}[dev]" | |
| pytest --pyargs fitsio --parallel-threads 4 --iterations 4 | |
| deactivate | |
| - uses: actions/upload-artifact@v7 | |
| with: | |
| name: whl-musl | |
| path: ./wheelhouse/*.whl | |
| osx-intel: | |
| name: osx-intel | |
| runs-on: macos-15-intel | |
| steps: | |
| - uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0 | |
| with: | |
| ref: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.ref || '' }} | |
| fetch-depth: 0 | |
| fetch-tags: true | |
| - uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0 | |
| with: | |
| python-version: '${{ env.PYVER }}' | |
| - name: build wheels | |
| uses: pypa/cibuildwheel@294735312765b09d24a2fbec22660ce817587d55 # v4.1.0 | |
| env: | |
| CIBW_BUILD: "*macosx*" | |
| CIBW_ARCHS: auto64 | |
| CIBW_SKIP: ${{ env.CIBW_SKIP_VAL }} | |
| # CIBW_BEFORE_ALL: brew install fftw || true | |
| CIBW_ENVIRONMENT: >- | |
| MACOSX_DEPLOYMENT_TARGET=13.0 | |
| - name: test wheel for python ${{ env.PYVER }} | |
| run: | | |
| pystr='${{ env.PYVER }}' | |
| pystr=${pystr//./} | |
| whl=$(ls ./wheelhouse/*cp${pystr}*.whl) | |
| python -m pip install --upgrade pip | |
| pip install "${whl}[dev]" | |
| pytest --pyargs fitsio --parallel-threads 4 --iterations 4 | |
| - uses: actions/upload-artifact@v7 | |
| with: | |
| name: whl-macos | |
| path: ./wheelhouse/*.whl | |
| osx-arm: | |
| name: osx-arm | |
| runs-on: macos-latest | |
| steps: | |
| - uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0 | |
| with: | |
| ref: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.ref || '' }} | |
| fetch-depth: 0 | |
| fetch-tags: true | |
| - uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0 | |
| with: | |
| python-version: '${{ env.PYVER }}' | |
| - name: build wheels | |
| uses: pypa/cibuildwheel@294735312765b09d24a2fbec22660ce817587d55 # v4.1.0 | |
| env: | |
| CIBW_BUILD: "*macosx*" | |
| CIBW_ARCHS: arm64 | |
| CIBW_SKIP: ${{ env.CIBW_SKIP_VAL }} | |
| # CIBW_BEFORE_ALL: brew install llvm libomp fftw eigen | |
| CIBW_ENVIRONMENT: >- | |
| MACOSX_DEPLOYMENT_TARGET=14.7 | |
| - name: test wheel for python ${{ env.PYVER }} | |
| run: | | |
| pystr='${{ env.PYVER }}' | |
| pystr=${pystr//./} | |
| whl=$(ls ./wheelhouse/*cp${pystr}*.whl) | |
| python -m pip install --upgrade pip | |
| pip install "${whl}[dev]" | |
| pytest --pyargs fitsio --parallel-threads 4 --iterations 4 | |
| - uses: actions/upload-artifact@v7 | |
| with: | |
| name: whl-arm | |
| path: ./wheelhouse/*.whl | |
| win-amd64: | |
| name: win-amd64 | |
| runs-on: windows-latest | |
| steps: | |
| - uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0 | |
| with: | |
| ref: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.ref || '' }} | |
| fetch-depth: 0 | |
| fetch-tags: true | |
| - uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0 | |
| with: | |
| python-version: '${{ env.PYVER }}' | |
| - name: make nmake available | |
| uses: ilammy/msvc-dev-cmd@v1 | |
| - name: build wheels | |
| uses: pypa/cibuildwheel@294735312765b09d24a2fbec22660ce817587d55 # v4.1.0 | |
| env: | |
| CIBW_BUILD: "*win_amd64*" | |
| CIBW_ARCHS: auto64 | |
| CIBW_SKIP: ${{ env.CIBW_SKIP_VAL }} | |
| - name: test wheel for python ${{ env.PYVER }} | |
| shell: cmd | |
| run: | | |
| set pystr=${{ env.PYVER }} | |
| set pystr=%pystr:.=% | |
| echo python version string is %pystr% | |
| if errorlevel 1 exit 1 | |
| python -m pip install --upgrade pip | |
| if errorlevel 1 exit 1 | |
| for %%f in (.\wheelhouse\*cp%pystr%*.whl) do pip install %%f[dev] | |
| if errorlevel 1 exit 1 | |
| pytest --pyargs fitsio | |
| if errorlevel 1 exit 1 | |
| - uses: actions/upload-artifact@v7 | |
| with: | |
| name: whl-win-amd64 | |
| path: ./wheelhouse/*.whl | |
| sdist: | |
| name: sdist | |
| needs: [linux-manylinux, linux-musl, osx-intel, osx-arm, win-amd64] | |
| # Just need to build sdist on a single machine | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: free disk space | |
| uses: endersonmenezes/free-disk-space@v3 | |
| with: | |
| remove_android: true | |
| remove_dotnet: true | |
| remove_haskell: true | |
| rm_cmd: "rmz" | |
| - uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0 | |
| with: | |
| ref: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.ref || '' }} | |
| fetch-depth: 0 | |
| fetch-tags: true | |
| - uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0 | |
| with: | |
| python-version: '${{ env.PYVER }}' | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install -U pip | |
| pip install -U build | |
| - name: download wheels | |
| uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1 | |
| with: | |
| path: ./wheels | |
| pattern: whl-* | |
| merge-multiple: true | |
| - name: build sdist | |
| run: | | |
| python -m build --sdist . | |
| ls -l dist | |
| tar tvfz dist/*.tar.gz | |
| - name: copy wheels to dist | |
| run: | | |
| echo ls -l wheels | |
| ls -l wheels | |
| cp wheels/*.whl dist | |
| echo ls -l dist | |
| ls -l dist | |
| - name: publish to pypi | |
| uses: pypa/gh-action-pypi-publish@cef221092ed1bacb1cc03d23a2d87d1d172e277b # v1.14.0 | |
| if: github.event_name == 'release' || github.event_name == 'workflow_dispatch' | |
| with: | |
| verbose: true | |
| skip-existing: true | |
| password: ${{ secrets.PYPI_API_TOKEN }} |