diff --git a/earthaccess/store.py b/earthaccess/store.py
index da2c74ca..60e63147 100644
--- a/earthaccess/store.py
+++ b/earthaccess/store.py
@@ -183,7 +183,7 @@ def make_instance(
         # NOTE: This uses the first data_link listed in the granule. That's not
         #       guaranteed to be the right one.
         return earthaccess.open([granule])[0]
-    return EarthAccessFile(loads(data), granule)
+    return EarthAccessFile(loads(data), granule)  # noqa: S301
 
 
 def _get_url_granule_mapping(
diff --git a/pyproject.toml b/pyproject.toml
index 16ce83ea..044887bd 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -211,7 +211,6 @@ ignore = [
   "D417",
   "E501",
   "FIX002",
-  "PGH003",
   "PT006",
   "PT007",
   "PT009",
@@ -219,12 +218,7 @@ ignore = [
   "PT012",
   "PT017",
   "PT027",
-  "S101",
-  "S108",
   "S113",
-  "S301",
-  "S603",
-  "S607",
   "TD002",
   "TD003",
   "TD004"
@@ -236,7 +230,7 @@ combine-as-imports = true
 [tool.ruff.lint.per-file-ignores]
 # Allow `print` and `pprint` in notebooks
 "*.ipynb" = ["T201", "T203", "N803", "RET504", "ERA001", "PLR2004", "PD002", "PD010", "PD011", "EM", "ARG001", "BLE001", "FBT","TRY003"]
-"tests/**/*.py" = ["PLR2004", "FBT", "INP001", "SLF001"]
+"tests/**/*.py" = ["PLR2004", "FBT", "INP001", "SLF001", "S101", "S108", "S301", "S603", "S607"]
 "scripts/**/*.py" = ["INP001"]
 
 [tool.ruff.lint.pydocstyle]
diff --git a/scripts/yamlfmt.py b/scripts/yamlfmt.py
index 56886adf..95572722 100644
--- a/scripts/yamlfmt.py
+++ b/scripts/yamlfmt.py
@@ -14,8 +14,13 @@
 """
 
 import platform
+import shutil
 import subprocess
 import sys
 
+yamlfmt_path = shutil.which("yamlfmt")
+if yamlfmt_path is None:
+    sys.exit("yamlfmt not found on PATH")
+
 if platform.system() != "Windows":
-    sys.exit(subprocess.call(["yamlfmt", *sys.argv[1:]]))
+    sys.exit(subprocess.call([yamlfmt_path, *sys.argv[1:]]))  # noqa: S603