LatticeKrigRPackage/makePackage at main · dnychka/LatticeKrigRPackage · GitHub

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# run check
~/Src/R-devel/bin/R  CMD build --force  LatticeKrig
~/Src/R-devel/bin/R  CMD check --as-cran LatticeKrig_5.4.tar.gz

# all the checks and tests are in fields.Rcheck
# to create comparision files for tests

# first make sure fields tests out
grep FAILED LatticeKrig.Rcheck/tests/*.Rout

# turn up any warnings that print from running examples:
grep Warning LatticeKrig.Rcheck/fields-Ex*.Rout

# Now check \dontrun examples
cd LatticeKrig.Rcheck
sed -e "s/##D/ /" LatticeKrig-ex.R > temp.R
sed -e "s/## Not run:/ timestamp() ## Dont Run /" temp.R > temp1.R
sed -e "s/library('LatticeKrig')/library('LatticeKrig', lib.loc='.')/" temp1.R > all-ex.R
R CMD BATCH --save  all-ex.R   all-ex.Rout

#Use this to look for timing of sections

egrep -F 'Name:|##------ Sat'  *.Rout


#################

# take a look
grep Warning all-ex*.Rout
open LatticeKrig-Ex.pdf

# then if tests are correct
cp  LatticeKrig.Rcheck/tests/LKrig.basis.test.Rout       LatticeKrig/tests/LKrig.basis.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.precision.test.Rout   LatticeKrig/tests/LKrig.precision.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.test.Rout             LatticeKrig/tests/LKrig.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.lnPlike.test.Rout     LatticeKrig/tests/LKrig.lnPlike.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.nullspace.test.Rout   LatticeKrig/tests/LKrig.nullspace.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.se.test.Rout          LatticeKrig/tests/LKrig.se.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.test.3D.Rout          LatticeKrig/tests/LKrig.test.3D.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.FindNorm.test.Rout    LatticeKrig/tests/LKrig.FindNorm.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.LKCylinder.test.Rout  LatticeKrig/tests/LKrig.LKCylinder.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.test.inverse.Rout     LatticeKrig/tests/LKrig.test.inverse.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrigMarginalVariance.test.Rout LatticeKrig/tests/LKrigMarginalVariance.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrig.testFindAwght.Rout    LatticeKrig/tests/LKrig.testFindAwght.Rout.save

cp  LatticeKrig.Rcheck/tests/LKrig.fixedPart.test.Rout    LatticeKrig/tests/LKrig.fixedPart.test.Rout.save
cp  LatticeKrig.Rcheck/tests/LKrigNormalizeBasis.test.Rout    LatticeKrig/tests/LKrigNormalizeBasis.test.Rout.save
########## final build for version
#
R CMD build --force LatticeKrig

R CMD check --as-cran LatticeKrigRIGHTVERSION.gz


############ Changing copyright date
This is happening in RWork  .
#
cd ~/MyHome/Repositories/LatticeKrigRPackage/LatticeKrig/RWork

ls *.R | wc

grep 'or see http' *.R | wc
grep  'GNU General Public License for more details' *.R | wc
grep -L 'GNU General Public License for more details' *.R | wc

grep 'or see http' *.R | wc


# old style copyright header
grep -l  'or see http' *.R > filesOldC.txt
foreach fileString (`cat filesOldC.txt`)
    echo "Processing: $fileString"
    cp $fileString temp.R
    sed '1,/or see http/d'  temp.R > temp2.R
 cat ../../CopyrightHeader.txt temp2.R > $fileString
end
rm temp.R
rm temp2.R


# Now old copyright
grep -l  'Copyright (C) 2024' *.R > filesOldC.txt
foreach fileString (`cat filesOldC.txt`)
    echo "Processing: $fileString"
    cp $fileString temp.R
    sed '1,/GNU General Public License for more details/d'  temp.R > temp2.R
 cat ../../CopyrightHeader.txt temp2.R > $fileString
end
rm temp.R
rm temp2.R

############ Changing copyright date for docs

# cat to top new copyright
ls *.Rd > docfiles.txt
foreach fileString (`cat docfiles.txt`)
    echo "Processing: $fileString"
    cp $fileString temp.R
 cat ../../CopyrightHeaderDoc.txt temp.R > $fileString
end