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Heatmap themes #49

Description

@catchambers

Deliverable

Allow users to choose between two color themes for heatmaps in sortscore.

Files

sortscore/demo_data
sortscore/sortscore/visualization/heatmaps.py

Dependancies

  • Confirm if we want to update config file (heatmap_theme = blue-red vs magma?) or provide instructions for using the Python API

Checklist

  • add to CLI options
  • add to config options
  • add demo for theme change
    • benefits of magma (emphasizes loss of function if there aren't reliable gain of function signals?)
    • benefits of red/blue (more widely recognizable, shows gain/loss of function)
  • write tests

Estimated effort
2 hours

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Activity

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