Executor logs directory is not used in job submission

[danilotat]

The parameter declared in config_main is not used by the executor during job submissions with both SLURM and SGE.

SLURM:

ENEO/workflow/profile/slurm_profile/config.v8+.yaml

Lines 3 to 10 in a73af15

	cluster-generic-submit-cmd:
	mkdir -p slurm-logs/{rule} &&
	sbatch
	--cpus-per-task={resources.ncpus}
	--mem={resources.mem}
	--time={resources.time}
	--job-name=smk-{rule}-{wildcards}
	--output=slurm-logs/{rule}/{rule}-{wildcards}-%j.out

SGE:

ENEO/workflow/profile/sge_profile/config.v8+.yaml

Lines 2 to 11 in a73af15

	cluster-generic-submit-cmd:
	mkdir -p slurm-logs/{rule} &&
	qsub
	-pe smp {resources.ncpus}
	-l mem_free={resources.mem}
	-l h_rt={resources.time}
	-N smk-{rule}-{wildcards}
	-o slurm-logs/{rule}/{rule}-{wildcards}-$JOB_ID.out
	-e slurm-logs/{rule}/{rule}-{wildcards}-$JOB_ID.err
	-q all.q