BamScale/DESCRIPTION at main · cparsania/BamScale · GitHub

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Package: BamScale
Type: Package
Title: Bioconductor-Friendly Multithreaded BAM Processing
Version: 0.99.14
Authors@R: c(
    person("Chirag", "Parsania", email = "chirag.parsania@gmail.com", role = c("aut", "cre"))
  )
Description: Multithreaded sequential BAM processing built on top of the
    ompBAM C++ engine. BamScale provides user-friendly BAM read and scan
    interfaces designed for compatibility with existing Bioconductor workflows.
License: MIT + file LICENSE
biocViews: Software, DataImport, Sequencing, Coverage, Alignment, QualityControl
Encoding: UTF-8
LazyData: false
Roxygen: list(markdown = TRUE)
Imports:
    BiocGenerics,
    BiocParallel,
    Biostrings,
    GenomeInfoDb,
    GenomicAlignments,
    GenomicRanges,
    IRanges,
    methods,
    ompBAM,
    Rcpp,
    Rsamtools,
    S4Vectors
LinkingTo:
    Rcpp,
    ompBAM,
    S4Vectors,
    IRanges,
    XVector
Suggests:
    BiocStyle,
    chipseqDBData,
    dplyr,
    ExperimentHub,
    ggplot2,
    knitr,
    readr,
    rmarkdown,
    rtracklayer,
    scales,
    tibble,
    testthat (>= 3.0.0),
    tidyr
VignetteBuilder:
    knitr
Config/testthat/edition: 3
SystemRequirements: C++17, OpenMP
NeedsCompilation: yes
URL: https://cparsania.github.io/BamScale/
BugReports: https://github.com/cparsania/BamScale/issues
Config/roxygen2/version: 8.0.0