Hi,
I am using DuctApe version 0.18.2 with Python 2.7.13.
I ran the code successfully up to the step where I added KEGG annotations (obtained with KAAS). I attach the stats file in case something wrong might be noticed:

However, when I run dgenome start, I obtain this in stdout:
14:19:06 - link (rpair) failed!
14:19:06 - link (rpair) failed!
14:19:07 - link (rpair) failed!
14:19:08 - link (rpair) failed!
14:19:08 - link (rpair) failed!
14:19:10 - link (rpair) failed!
14:19:10 - link (rpair) failed!
14:19:11 - link (rpair) failed!
14:19:11 - link (rpair) failed!
14:19:11 - link (rpair) failed!
14:19:13 - link (rpair) failed!
14:19:13 - KEGG API error, aborting
14:19:13 - Failure! KEGG API error
14:19:13 - Could not fetch data from KEGG
14:19:13 - Genome(s) could not be mapped to kegg!
I also attach the full log for reference. I've seen in the google group that someone had the same problem back in 2020, and that issue was fixed thanks to an update.
Could you help me sorting this out?
Thank you in advance!
ductape.log
Edited with more complete log
Hi,
I am using DuctApe version 0.18.2 with Python 2.7.13.
I ran the code successfully up to the step where I added KEGG annotations (obtained with KAAS). I attach the stats file in case something wrong might be noticed:
However, when I run dgenome start, I obtain this in stdout:
14:19:06 - link (rpair) failed!
14:19:06 - link (rpair) failed!
14:19:07 - link (rpair) failed!
14:19:08 - link (rpair) failed!
14:19:08 - link (rpair) failed!
14:19:10 - link (rpair) failed!
14:19:10 - link (rpair) failed!
14:19:11 - link (rpair) failed!
14:19:11 - link (rpair) failed!
14:19:11 - link (rpair) failed!
14:19:13 - link (rpair) failed!
14:19:13 - KEGG API error, aborting
14:19:13 - Failure! KEGG API error
14:19:13 - Could not fetch data from KEGG
14:19:13 - Genome(s) could not be mapped to kegg!
I also attach the full log for reference. I've seen in the google group that someone had the same problem back in 2020, and that issue was fixed thanks to an update.
Could you help me sorting this out?
Thank you in advance!
ductape.log
Edited with more complete log