Having more than two assemblies - how to format command

[gchaput19]

To whom it may concern,

I wanted to reconcile 6 assemblies using MAC. I can use the current README to reconcile two assemblies (query and reference) but based on my understanding of the paper it is possible to add more assemblies, correct? Can you show the correct script to use to have MAC2.0 work for more than 2 assemblies?

[LiTang1013]

您的邮件我已收到，谢谢！

[Sanrrone]

I have the same problem, how can I merge all my assemblies in one line?

[LiTang1013]

您的邮件我已收到，谢谢！

[LiTang1013]

If you have multiple contig files (over 3) to merge, please try to merge any two of them first, then merge the result with the other files iteratively.