Tutorials (dev) are broken on current version (v0.0.3)

[cmarcotte]

Running https://bifurcationkit.github.io/DDEBifurcationKit.jl/dev/tutorials/dde/neuron/#Neuron-model-(codim-2,-periodic-orbits) in new session errors at continuation call with:

ERROR: MethodError: no method matching update!(::ConstantDDEBifProblem{…}, ::ContIterable{…}, ::ContState{…})
The function `update!` exists, but no method is defined for this combination of argument types.

Closest candidates are:
  update!(::BifurcationKit.WrapPOTrap, ::Any...; k...)
   @ BifurcationKit ~/.julia/packages/BifurcationKit/8iOmk/src/periodicorbit/PeriodicOrbitUtils.jl:41
  update!(::BifurcationKit.WrapPOSh, ::Any...; k...)
   @ BifurcationKit ~/.julia/packages/BifurcationKit/8iOmk/src/periodicorbit/PeriodicOrbitUtils.jl:40
  update!(::BifurcationKit.HopfMAProblem, ::Any...; k...)
   @ BifurcationKit ~/.julia/packages/BifurcationKit/8iOmk/src/codim2/codim2.jl:134
  ...

Stacktrace:
 [1] update_prob!
   @ ~/.julia/packages/BifurcationKit/8iOmk/src/Continuation.jl:223 [inlined]
 [2] iterate(it::ContIterable{…}, state::ContState{…}; _verbosity::UInt8)
   @ BifurcationKit ~/.julia/packages/BifurcationKit/8iOmk/src/Continuation.jl:452
 [3] iterate
   @ ~/.julia/packages/BifurcationKit/8iOmk/src/Continuation.jl:419 [inlined]
 [4] continuation!(it::ContIterable{…}, state::ContState{…}, contRes::ContResult{…})
   @ BifurcationKit ~/.julia/packages/BifurcationKit/8iOmk/src/Continuation.jl:551
 [5] continuation(it::ContIterable{…})
   @ BifurcationKit ~/.julia/packages/BifurcationKit/8iOmk/src/Continuation.jl:578
 [6] continuation(prob::ConstantDDEBifProblem{…}, alg::PALC{…}, contparams::ContinuationPar{…}; linear_algo::Nothing, bothside::Bool, kwargs::@Kwargs{…})
   @ BifurcationKit ~/.julia/packages/BifurcationKit/8iOmk/src/Continuation.jl:641
 [7] top-level scope
   @ REPL[11]:1
Some type information was truncated. Use `show(err)` to see complete types.

Likewise for other tutorials.

]status yields:

⌅ [0f109fa4] BifurcationKit v0.4.18
  [954e4062] DDEBifurcationKit v0.0.3
  [0c46a032] DifferentialEquations v7.17.0
⌅ [f6369f11] ForwardDiff v0.10.39
  [91a5bcdd] Plots v1.41.2
  [295af30f] Revise v3.12.3
  [47a9eef4] SparseDiffTools v2.26.0

where the version of BK is limited by DDEBK.

[rveltz]

Very strange, it is written

[compat]
BifurcationKit = "^0.4.16, 0.5"

in Project.toml, so you should definitely be able to update.

[cmarcotte]

From empty, adding and pinning BK and adding DDEBK yields:

(ddebif) pkg> pin BifurcationKit
   Resolving package versions...
    Updating `~/Development/ddebif/Project.toml`
  [0f109fa4] ~ BifurcationKit v0.5.5 ⇒ v0.5.5 ⚲
    Updating `~/Development/ddebif/Manifest.toml`
  [0f109fa4] ~ BifurcationKit v0.5.5 ⇒ v0.5.5 ⚲

(ddebif) pkg> add DDEBifurcationKit
   Resolving package versions...
ERROR: Unsatisfiable requirements detected for package BifurcationKit [0f109fa4]:
 BifurcationKit [0f109fa4] log:
 ├─possible versions are: 0.1.0 - 0.5.5 or uninstalled
 ├─restricted to versions * by project [2dc68810], leaving only versions: 0.1.0 - 0.5.5
 │ └─project [2dc68810] log:
 │   ├─possible versions are: 0.0.0 or uninstalled
 │   └─project [2dc68810] is fixed to version 0.0.0
 ├─restricted to versions 0.5.5 by an explicit requirement, leaving only versions: 0.5.5
 └─restricted by compatibility requirements with DDEBifurcationKit [954e4062] to versions: [0.3.0 - 0.3.6, 0.4.8 - 0.4.18] — no versions left
   └─DDEBifurcationKit [954e4062] log:
     ├─possible versions are: 0.0.1 - 0.0.3 or uninstalled
     └─restricted to versions * by an explicit requirement, leaving only versions: 0.0.1 - 0.0.3

if that's helpful

[rveltz]

It should work on master, Ill push a tag asap

[cmarcotte]

Can confirm that

add BifurcationKit#master; pin BifurcationKit; add DDEBifurcationKit#main

does resolve the installation issue, and that the continuation not runs correctly. Thanks!