Skip to content

Curated qualitative trait classes are not linked to their numeric bins (temperature, pH, NaCl/halophily) #517

Description

@turbomam

For temperature, pH, and salinity, METPO has a curated qualitative ladder and a separate numeric-bin ladder, and they neither cross-reference nor agree on thresholds:

  • temperature: temperature preference (psychrophilic/mesophilic/thermophilic) vs the temperature optimum/range bins.
  • pH: pH growth preference (acidophilic/neutrophilic/alkaliphilic) vs the pH optimum/range bins (and there are two overlapping pH qualitative systems).
  • salinity: halophily preference vs the NaCl optimum/range bins.

Nothing links the qualitative classes to the numeric bins, and cut points disagree (mesophilic overload in #444; halophily vs Kushner in #474). Suggested fix: pick one threshold convention per axis, align both ladders, and connect each qualitative class to the bin set it subsumes.

Source: agentic content QC, 2026-06-06. Related: #444, #474.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Fields

    No fields configured for issues without a type.

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions