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47 lines (46 loc) · 1.77 KB
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from setuptools import setup
setup(
name="acinetoscope",
version="1.3.2",
author="Brown Beckley",
author_email="brownbeckley94@gmail.com",
description="Advanced Acinetobacter baumannii Genomic Analysis Platform",
long_description="Complete A. baumannii genomic analysis pipeline: MLST | K/O Locus | AMR | Plasmid | Virulence | Quality Control | Critical Genes Tracked: Carbapenemases • ESBLs • Colistin Resistance • Tigecycline Resistance • Biofilm Formation • Efflux Pumps • Environmental Co-Selection | Summary Reports",
long_description_content_type="text/markdown",
url="https://github.com/bbeckley-hub/acinetoscope",
packages=['acinetoscope'],
include_package_data=True,
python_requires=">=3.9",
install_requires=[
"pandas>=1.5.0",
"biopython>=1.85",
"psutil>=5.9.0",
"requests>=2.28.0",
"tqdm>=4.64.0",
"click>=8.0.0",
"fastani>=1.34",
"kaptive>=3.1.0",
"beautifulsoup4>=4.11.0",
"lxml>=4.9.0",
"matplotlib>=3.5.0",
"seaborn>=0.12.0",
],
entry_points={
"console_scripts": [
"acinetoscope=acinetoscope.acinetoscope:main",
],
},
classifiers=[
"Development Status :: 4 - Beta",
"Intended Audience :: Science/Research",
"Topic :: Scientific/Engineering :: Bio-Informatics",
"License :: OSI Approved :: MIT License",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Programming Language :: Python :: 3.13",
"Programming Language :: Python :: 3.14",
],
)