Hi, thanks for developing such a useful tool to detect differential loops between two conditions. The output of diff_mustache.py contains all loops in two conditions along with differential loops in two files named ended by diffloop1 and diffloop2. As I can tell that diffloop1 gives differential loops in condition_1, however, the FDR and DETECTION_SCALE values in diffloop1 files are exactly the same as values in loop1. Does that mean the two values in diffloop1 do not represent the significance and strength of differential, instead, just the significance and strength of that loop calling? Please correct me if I am wrong. If that is the case, is there anyways that we can know how much the difference is for a loop between two conditions? Thanks!
Hi, thanks for developing such a useful tool to detect differential loops between two conditions. The output of diff_mustache.py contains all loops in two conditions along with differential loops in two files named ended by diffloop1 and diffloop2. As I can tell that diffloop1 gives differential loops in condition_1, however, the FDR and DETECTION_SCALE values in diffloop1 files are exactly the same as values in loop1. Does that mean the two values in diffloop1 do not represent the significance and strength of differential, instead, just the significance and strength of that loop calling? Please correct me if I am wrong. If that is the case, is there anyways that we can know how much the difference is for a loop between two conditions? Thanks!