pyproject.toml

[project]
name = "ybis-platform"
version = "0.1.0"
description = "Governed agent runtime with workflows, syscalls, evidence, and MCP."
readme = "README.md"
requires-python = ">=3.11"
dependencies = [
  "pydantic>=2.7",
  "pydantic-settings>=2.3",
  "langgraph>=0.2",
  "anyio>=4.0",
  "rich>=13.0",
  "httpx>=0.27",
  "aiosqlite>=0.20",
  "typer>=0.12",
  "tenacity>=8.2",
  "pyyaml>=6.0",
  "e2b>=1.0.0",
  "e2b-code-interpreter>=1.0.0",
  "GitPython>=3.1.40",
  "mcp>=1.0.0",
]

[project.scripts]
ybis = "ybis.cli:main"

[tool.setuptools]
packages = ["ybis", "ybis.adapters", "ybis.contracts", "ybis.control_plane", "ybis.data_plane", "ybis.dependencies", "ybis.executors", "ybis.migrations", "ybis.orchestrator", "ybis.services", "ybis.services.mcp_tools", "ybis.syscalls", "ybis.workflows", "ybis.cli"]
package-dir = {"ybis" = "src/ybis"}

[project.optional-dependencies]
dev = [
  "ruff>=0.5.0",
  "mypy>=1.10",
  "pytest>=8.0",
  "pytest-asyncio>=0.23",
  "pytest-cov>=5.0",
  "pytest-xdist>=3.0.0",  # Parallel test execution
  "pytest-json-report>=1.5",  # JSON report for structured test output
  "types-requests",
  "pre-commit>=3.7",
  "bandit>=1.7.0",
  "hypothesis>=6.0",  # Property-based testing (Week 2)
  "mutmut>=2.4",  # Mutation testing (Week 2)
  "mkdocs>=1.5",  # Documentation site (Week 2)
  "mkdocs-material>=9.0",  # Material theme for MkDocs (Week 2)
  "mkdocstrings[python]>=0.24",  # Auto API docs from docstrings (Week 2)
  "gptcache>=0.1.0",  # Semantic LLM caching (Week 3)
  "dspy-ai>=2.0",  # Prompt optimization (Week 3)
  # Note: Programmatic Tool Calling uses LOCAL Ollama (no anthropic SDK needed)
  # Note: Mem0 uses LOCAL VectorStore (no mem0ai needed)
  "pyan3>=1.1.0",
  "llama-index>=0.10.0",
  "pip-audit>=2.6.0",
  "import-linter>=2.0",  # Module boundary enforcement (Constitution III.5)
]
# Adapter dependencies (version-pinned per adapter)
adapters-chroma = [
  "chromadb>=0.4.0,<0.5.0",
  "litellm>=0.1.0",
]
adapters-qdrant = [
  "qdrant-client>=1.0.0,<2.0.0",
  "litellm>=0.1.0",
]
adapters-neo4j = [
  "neo4j>=5.0.0,<6.0.0",
]
adapters-llamaindex = [
  "llama-index>=0.10.0,<0.11.0",
  "llama-index-core>=0.10.0,<0.11.0",
]
adapters-redis = [
  "redis>=5.0.0,<6.0.0",
]
adapters-aider = [
  "aider-chat>=0.50.0",
]
adapters-openhands = [
  "openhands-ai==1.2.1",
]
adapters-langfuse = [
  "langfuse>=2.0.0,<3.0.0",
]
adapters-opentelemetry = [
  "opentelemetry-api>=1.20.0,<2.0.0",
  "opentelemetry-sdk>=1.20.0,<2.0.0",
  "opentelemetry-exporter-otlp>=1.20.0,<2.0.0",
]
# Install all adapters: pip install -e ".[adapters-chroma,adapters-qdrant,adapters-neo4j,adapters-llamaindex,adapters-redis,adapters-aider,adapters-langfuse,adapters-opentelemetry]"
all-adapters = [
  "chromadb>=0.4.0,<0.5.0",
  "qdrant-client>=1.0.0,<2.0.0",
  "neo4j>=5.0.0,<6.0.0",
  "llama-index>=0.10.0,<0.11.0",
  "llama-index-core>=0.10.0,<0.11.0",
  "redis>=5.0.0,<6.0.0",
  "aider-chat>=0.1.0,<0.2.0",
  "langfuse>=2.0.0,<3.0.0",
  "opentelemetry-api>=1.20.0,<2.0.0",
  "opentelemetry-sdk>=1.20.0,<2.0.0",
  "opentelemetry-exporter-otlp>=1.20.0,<2.0.0",
  "litellm>=0.1.0",
]

[tool.ruff]
line-length = 100
target-version = "py311"
src = ["src", "cli", "tests"]
extend-exclude = ["workspaces", "vendors", "third_party", ".venv"]

[tool.ruff.lint]
select = ["E", "F", "I", "B", "UP", "N", "SIM", "RUF"]
ignore = ["E501"]  # handled by formatter

[tool.ruff.format]
quote-style = "double"
indent-style = "space"

[tool.pytest.ini_options]
testpaths = ["tests"]
addopts = """
    -v
    --tb=short
    --strict-markers
    --strict-config
    -ra
"""
asyncio_mode = "auto"
asyncio_default_fixture_loop_scope = "function"
markers = [
    "unit: Fast isolated unit tests",
    "integration: Tests requiring external services",
    "e2e: End-to-end workflow tests",
    "slow: Tests taking > 5 seconds",
    "smoke: Quick sanity checks",
    "llm: Tests requiring LLM API (expensive)",
    "database: Tests requiring database",
    "vector_store: Tests requiring vector store",
    "property: Property-based tests using Hypothesis",
]
filterwarnings = [
    "ignore::DeprecationWarning:httpx._models",
    "ignore::UserWarning:pydantic.main",
    "ignore::DeprecationWarning:litellm",
]

[tool.mypy]
python_version = "3.11"
mypy_path = "src"
packages = ["ybis"]  # maps to src/ybis
strict = true
warn_unused_ignores = true
warn_redundant_casts = true
no_implicit_optional = true
disallow_any_generics = true
disallow_untyped_defs = true
check_untyped_defs = true
exclude = "(workspaces|vendors|third_party|.venv)/"

[tool.coverage.run]
branch = true
source = ["src/ybis"]
omit = [
    "*/tests/*",
    "*/__pycache__/*",
    "*/migrations/*",
]
parallel = true
concurrency = ["thread", "greenlet"]

[tool.coverage.report]
show_missing = true
skip_covered = false
fail_under = 60
exclude_lines = [
    "pragma: no cover",
    "def __repr__",
    "raise NotImplementedError",
    "if TYPE_CHECKING:",
    "if __name__ == .__main__.:",
    "@abstractmethod",
]

[tool.coverage.html]
directory = "htmlcov"

[tool.coverage.xml]
output = "coverage.xml"

# Import-linter configuration (Constitution III.5: Layer Discipline)
# See MODULE_BOUNDARIES.md for rules
[tool.importlinter]
root_package = "ybis"

[[tool.importlinter.contracts]]
name = "Syscalls cannot import from orchestrator"
type = "forbidden"
source_modules = ["ybis.syscalls"]
forbidden_modules = ["ybis.orchestrator", "ybis.workflows"]

[[tool.importlinter.contracts]]
name = "Adapters cannot import from orchestrator"
type = "forbidden"
source_modules = ["ybis.adapters"]
forbidden_modules = ["ybis.orchestrator"]

[[tool.importlinter.contracts]]
name = "Data plane cannot import from orchestrator"
type = "forbidden"
source_modules = ["ybis.data_plane"]
forbidden_modules = ["ybis.orchestrator", "ybis.workflows"]

[[tool.importlinter.contracts]]
name = "Control plane cannot import from orchestrator"
type = "forbidden"
source_modules = ["ybis.control_plane"]
forbidden_modules = ["ybis.orchestrator", "ybis.workflows"]

[[tool.importlinter.contracts]]
name = "Services cannot import from orchestrator"
type = "forbidden"
source_modules = ["ybis.services"]
forbidden_modules = ["ybis.orchestrator"]

[[tool.importlinter.contracts]]
name = "Constants can be imported by anyone"
type = "independence"
modules = ["ybis.constants"]

[[tool.importlinter.contracts]]
name = "Contracts can be imported by anyone"
type = "independence"
modules = ["ybis.contracts"]

# Hypothesis configuration (Week 2)
[tool.hypothesis]
max_examples = 100  # Default number of examples to generate
deadline = 5000  # Max time per test in milliseconds

# Bandit configuration (Security SAST)
[tool.bandit]
exclude_dirs = ["vendors", "legacy", "workspaces/archive", ".venv", "tests"]
skips = ["B101"]  # Skip assert_used (tests use asserts)