reneo/pyproject.toml at develop · Vini2/reneo · GitHub

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[build-system]
requires = ["setuptools>=61.0", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "reneo"
dynamic = ["version"]
description = "Unraveling Viral Genomes from Metagenomes"
readme = { file = "README.md", content-type = "text/markdown" }
requires-python = ">=3.10"
license = { file = "LICENSE" }
authors = [
    { name = "Vijini Mallawaarachchi", email = "viji.mallawaarachchi@gmail.com" },
]
dependencies = [
    "snakemake>=7.14.0,<8",
    "pulp>=2.7,<2.8",
    "pyyaml>=6.0",
    "click>=8.1.3",
    "metasnek>=0.0.5",
    "snaketool-utils>=0.0.4",
]
classifiers = [
    "Development Status :: 4 - Beta",
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: MIT License",
    "Natural Language :: English",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Operating System :: OS Independent",
]

[project.urls]
Homepage = "https://github.com/Vini2/reneo"

[project.scripts]
reneo = "reneo.__main__:main"

[tool.setuptools]
packages = { find = { include = ["reneo*"] } }
include-package-data = true

[tool.setuptools.dynamic]
version = { file = ["reneo/reneo.VERSION"] }

[tool.setuptools.package-data]
reneo = [
    "reneo.CITATION",
    "reneo.LICENSE",
    "reneo.VERSION",
    "config/*.yaml",
    "test_data/*.gfa",
    "test_data/*.hmm",
    "test_data/reads/*.fastq.gz",
    "workflow/*.smk",
    "workflow/envs/*.yaml",
    "workflow/rules/*.smk",
    "workflow/scripts/*.py",
    "workflow/scripts/reneo_utils/*.py",
]

[tool.setuptools.exclude-package-data]
reneo = [
    "**/.DS_Store",
    "**/__pycache__/*",
    "**/*.pyc",
]