Following your tutorial, I built the environment through leadd_conda_env.yml,generate fragment.db fragment.cqr and other files,when i run the leadd_example.py,cannot found fragment_database_file through reconstructionSettings,have any method resolved this problem?
this is error message:
(LEADDtest) huqiao@user01-PR4904P:~/expriment/LEADD/example$ python leadd_example.py
Traceback (most recent call last):
File "/home/huqiao/expriment/LEADD/example/leadd_example.py", line 97, in
Main()
File "/home/huqiao/expriment/LEADD/example/leadd_example.py", line 47, in Main
settings = pyLEADD.ReconstructionSettings('reconstruction_settings.txt')
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
RuntimeError: ERROR: FRAGMENT_DATABASE_FILE doesn't reference an existing file.
this is reconstructionSettings.txt:
Input file settings
FRAGMENT_DATABASE_FILE /home/huqiao/expriment/LEADD/example/fragment.db
CONNECTION_QUERY_RESULTS_FILE /home/huqiao/expriment/LEADD/example/fragment.cqr
thanks for your reply
Following your tutorial, I built the environment through leadd_conda_env.yml,generate fragment.db fragment.cqr and other files,when i run the leadd_example.py,cannot found fragment_database_file through reconstructionSettings,have any method resolved this problem?
this is error message:
(LEADDtest) huqiao@user01-PR4904P:~/expriment/LEADD/example$ python leadd_example.py
Traceback (most recent call last):
File "/home/huqiao/expriment/LEADD/example/leadd_example.py", line 97, in
Main()
File "/home/huqiao/expriment/LEADD/example/leadd_example.py", line 47, in Main
settings = pyLEADD.ReconstructionSettings('reconstruction_settings.txt')
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
RuntimeError: ERROR: FRAGMENT_DATABASE_FILE doesn't reference an existing file.
this is reconstructionSettings.txt:
Input file settings
FRAGMENT_DATABASE_FILE /home/huqiao/expriment/LEADD/example/fragment.db
CONNECTION_QUERY_RESULTS_FILE /home/huqiao/expriment/LEADD/example/fragment.cqr
thanks for your reply