From 2e9f71539a17524e1f148d2fe0171f1e55538a92 Mon Sep 17 00:00:00 2001 From: Eduard Kerkhoven Date: Sat, 11 Jul 2026 14:22:10 +0200 Subject: [PATCH 1/2] fix: remove LDHAL6A from MAR11479 GPR for consistency with MAR11476 (#528) MAR11476 and MAR11479 are the same promiscuous lactate dehydrogenase side-reaction on adjacent branched-chain 2-oxo acids. The GPR curation in #847 / #885 removed LDHAL6A (ENSG00000166800) from MAR11476 as not relevant to the reaction, but left it on MAR11479, leaving the two inconsistent. Remove LDHAL6A from MAR11479 as well so both carry the same five-gene rule (LDHB, LDHA, LDHC, LDHD, LDHAL6B). --- model/Human-GEM.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/model/Human-GEM.yml b/model/Human-GEM.yml index 681c03b0..1f7807c4 100644 --- a/model/Human-GEM.yml +++ b/model/Human-GEM.yml @@ -220025,7 +220025,7 @@ - MAM03186c: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000166816 or ENSG00000171989" + - gene_reaction_rule: "ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166816 or ENSG00000171989" - rxnFrom: "Recon3D" - eccodes: "1.1.1.27" - references: "PMID:1429566" From 19866129e13a78ece85287a9670132d02eceb5ab Mon Sep 17 00:00:00 2001 From: edkerk <7326655+edkerk@users.noreply.github.com> Date: Sat, 11 Jul 2026 12:27:51 +0000 Subject: [PATCH 2/2] chore: add macaw test result --- data/testResults/README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/data/testResults/README.md b/data/testResults/README.md index 68c1de51..9c598c91 100644 --- a/data/testResults/README.md +++ b/data/testResults/README.md @@ -4,7 +4,7 @@ The file here contains results from the [MACAW](https://github.com/Devlin-Moyer/ The test results shown here were obtained by the GitHub Actions run in: -- **PR #1029** (MACAW) +- **PR #1038** (MACAW) - **PR #973** (gene essentiality) The results will be updated by any subsequent pull request. Summary results are shown as a comment in the corresponding pull request.