From 1c57c390720e6cf20512007e76cdfedf3cbe3b69 Mon Sep 17 00:00:00 2001 From: Siddharth Chauhan Date: Tue, 8 Mar 2022 20:24:07 -0800 Subject: [PATCH] fix: update COG category mapping --- src/pymodulon/gene_util.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/src/pymodulon/gene_util.py b/src/pymodulon/gene_util.py index 0988cef..7685152 100644 --- a/src/pymodulon/gene_util.py +++ b/src/pymodulon/gene_util.py @@ -49,9 +49,10 @@ def cog2str(cog): "U": "Intracellular trafficking, secretion, and vesicular transport", "V": "Defense mechanisms", "W": "Extracellular structures", - "X": "No COG annotation", + "X": "Mobilome: prophages, transposons", "Y": "Nuclear structure", "Z": "Cytoskeleton", + "-": "No COG annotation", } return cog_dict[cog]