Docs: Sphinx→MkDocs migration + descending-drive Poisson fix + Optuna… #93
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| name: tests | |
| on: | |
| pull_request: | |
| branches: [main, improved-semg] | |
| push: | |
| branches: [main, improved-semg] | |
| workflow_dispatch: | |
| jobs: | |
| pytest: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: ["3.12", "3.13"] | |
| steps: | |
| - uses: actions/checkout@v5 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v6 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: System packages for NEURON / MPI (Linux) | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libopenmpi-dev openmpi-bin libgtk2.0-dev | |
| - name: Check NEURON 8.2.7 macOS wheel availability | |
| if: runner.os == 'macOS' | |
| run: | | |
| python -m pip install --upgrade pip | |
| if ! pip download --only-binary=:all: --no-deps neuron==8.2.7 -d /tmp/neuron_probe >/dev/null 2>&1; then | |
| echo "::error::No prebuilt neuron==8.2.7 wheel available for macOS on PyPI. uv sync will fail." | |
| exit 1 | |
| fi | |
| - name: Install uv | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install uv | |
| - name: Install project with dev group | |
| run: | | |
| uv sync --group dev | |
| - name: Compile NEURON mechanisms | |
| run: uv run poe setup_myogen | |
| - name: Run pytest | |
| run: uv run pytest tests/ -v |