@@ -226,7 +226,7 @@ <h5 class="quarto-listing-category-title">Categories</h5><div class="quarto-list
226226
227227< div class ="quarto-listing quarto-listing-container-default " id ="listing-listing ">
228228< div class ="list quarto-listing-default ">
229- < div class ="quarto-post image-right " data-index ="0 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDTmV1cmFsJTIwbW9kZWxpbmc= " data-listing-date-sort ="1779235200000 " data-listing-file-modified-sort ="1781694128611 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="4 " data-listing-word-count-sort ="686 ">
229+ < div class ="quarto-post image-right " data-index ="0 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDTmV1cmFsJTIwbW9kZWxpbmc= " data-listing-date-sort ="1779235200000 " data-listing-file-modified-sort ="1781694234221 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="4 " data-listing-word-count-sort ="686 ">
230230< div class ="thumbnail "> < a href ="../research/posts/critical_init.html " class ="no-external ">
231231
232232< img loading ="lazy " src ="../research/posts/images/ci_fig1.png " class ="thumbnail-image " alt ="schematic of neural recordings from mouse V1, whole-brain, and hippocampus; neural activity traces from the population, showing more correlated activity in V1 and whole-brain recordings versus more decorrelated activity in hippocampus ">
@@ -253,12 +253,12 @@ <h3 class="no-anchor listing-title">
253253< div class ="metadata ">
254254< a href ="../research/posts/critical_init.html " class ="no-external ">
255255< div class ="listing-author ">
256- Marius Pachitariu, Lin Zhong, Alexa Gracias, Amanda Minisi, Crystall Lopez, Carsen Stringer < br > < em > Nature</ em > , 2026
256+ Marius Pachitariu, Lin Zhong, Alexa Gracias, Amanda Minisi, Crystall Lopez, Carsen Stringer < br > < em > < b > Nature</ b > </ em >
257257</ div >
258258</ a >
259259</ div >
260260</ div >
261- < div class ="quarto-post image-right " data-index ="1 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3IlMkNNYWNoaW5lJTIwbGVhcm5pbmc= " data-listing-date-sort ="1769904000000 " data-listing-file-modified-sort ="1781694128611 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="378 ">
261+ < div class ="quarto-post image-right " data-index ="1 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3IlMkNNYWNoaW5lJTIwbGVhcm5pbmc= " data-listing-date-sort ="1769904000000 " data-listing-file-modified-sort ="1781694234221 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="378 ">
262262< div class ="thumbnail "> < a href ="../research/posts/facevseye.html " class ="no-external ">
263263
264264< img loading ="lazy " src ="../research/posts/images/syeda_cover.png " class ="thumbnail-image " alt ="neural activity in mouse visual cortex predicted by eye movements versus orofacial movements ">
@@ -294,7 +294,7 @@ <h3 class="no-anchor listing-title">
294294</ a >
295295</ div >
296296</ div >
297- < div class ="quarto-post image-right " data-index ="2 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3I= " data-listing-date-sort ="1756684800000 " data-listing-file-modified-sort ="1781694128718 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="290 ">
297+ < div class ="quarto-post image-right " data-index ="2 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3I= " data-listing-date-sort ="1756684800000 " data-listing-file-modified-sort ="1781694234317 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="290 ">
298298< div class ="thumbnail "> < a href ="../research/posts/spatialpred.html " class ="no-external ">
299299
300300< img loading ="lazy " src ="../research/posts/images/zhang_cover.png " class ="thumbnail-image " alt ="predictive coding surprise response in visual cortex ">
@@ -328,7 +328,7 @@ <h3 class="no-anchor listing-title">
328328</ a >
329329</ div >
330330</ div >
331- < div class ="quarto-post image-right " data-index ="3 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDTWFjaGluZSUyMGxlYXJuaW5n " data-listing-date-sort ="1751328000000 " data-listing-file-modified-sort ="1781694128718 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="547 ">
331+ < div class ="quarto-post image-right " data-index ="3 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDTWFjaGluZSUyMGxlYXJuaW5n " data-listing-date-sort ="1751328000000 " data-listing-file-modified-sort ="1781694234317 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="547 ">
332332< div class ="thumbnail "> < a href ="../research/posts/minimodels.html " class ="no-external ">
333333
334334< img loading ="lazy " src ="../research/posts/images/du_cover.jpg " class ="thumbnail-image " alt ="minimodels for single neurons in V1 ">
@@ -362,7 +362,7 @@ <h3 class="no-anchor listing-title">
362362</ a >
363363</ div >
364364</ div >
365- < div class ="quarto-post image-right " data-index ="4 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3I= " data-listing-date-sort ="1748736000000 " data-listing-file-modified-sort ="1781694128718 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="534 ">
365+ < div class ="quarto-post image-right " data-index ="4 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3I= " data-listing-date-sort ="1748736000000 " data-listing-file-modified-sort ="1781694234317 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="534 ">
366366< div class ="thumbnail "> < a href ="../research/posts/unsupervised.html " class ="no-external ">
367367
368368< img loading ="lazy " src ="../research/posts/images/zhong_cover.png " class ="thumbnail-image " alt ="unsupervised and supervised learning ">
@@ -396,7 +396,7 @@ <h3 class="no-anchor listing-title">
396396</ a >
397397</ div >
398398</ div >
399- < div class ="quarto-post image-right " data-index ="5 " data-categories ="U2VnbWVudGF0aW9uJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1739318400000 " data-listing-file-modified-sort ="1781694128611 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="1 " data-listing-word-count-sort ="198 ">
399+ < div class ="quarto-post image-right " data-index ="5 " data-categories ="U2VnbWVudGF0aW9uJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1739318400000 " data-listing-file-modified-sort ="1781694234221 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="1 " data-listing-word-count-sort ="198 ">
400400< div class ="thumbnail "> < a href ="../research/posts/cellpose3.html " class ="no-external ">
401401
402402< img loading ="lazy " src ="../research/posts/images/cellpose3_cover.png " class ="thumbnail-image " alt ="image restoration of various cellular images ">
@@ -430,7 +430,7 @@ <h3 class="no-anchor listing-title">
430430</ a >
431431</ div >
432432</ div >
433- < div class ="quarto-post image-right " data-index ="6 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1727740800000 " data-listing-file-modified-sort ="1781694128718 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="323 ">
433+ < div class ="quarto-post image-right " data-index ="6 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1727740800000 " data-listing-file-modified-sort ="1781694234317 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="323 ">
434434< div class ="thumbnail "> < a href ="../research/posts/rastermap.html " class ="no-external ">
435435
436436< img loading ="lazy " src ="../research/posts/images/rm_fig3.jpg " class ="thumbnail-image " alt ="rastermap visualization of neural activity during a virtual reality task ">
@@ -464,7 +464,7 @@ <h3 class="no-anchor listing-title">
464464</ a >
465465</ div >
466466</ div >
467- < div class ="quarto-post image-right " data-index ="7 " data-categories ="TWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1709251200000 " data-listing-file-modified-sort ="1781694128718 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="1 " data-listing-word-count-sort ="183 ">
467+ < div class ="quarto-post image-right " data-index ="7 " data-categories ="TWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1709251200000 " data-listing-file-modified-sort ="1781694234317 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="1 " data-listing-word-count-sort ="183 ">
468468< div class ="thumbnail "> < a href ="../research/posts/kilosort.html " class ="no-external ">
469469
470470< img loading ="lazy " src ="../research/posts/images/kilosort_logo_small.png " class ="thumbnail-image " alt ="spikes colored by amplitude along probe ">
@@ -496,7 +496,7 @@ <h3 class="no-anchor listing-title">
496496</ a >
497497</ div >
498498</ div >
499- < div class ="quarto-post image-right " data-index ="8 " data-categories ="QmVoYXZpb3IlMkNUaG91c2FuZHMlMjBvZiUyMG5ldXJvbnMlMkNNYWNoaW5lJTIwbGVhcm5pbmclMkNUb29scw== " data-listing-date-sort ="1698796800000 " data-listing-file-modified-sort ="1781694128611 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="255 ">
499+ < div class ="quarto-post image-right " data-index ="8 " data-categories ="QmVoYXZpb3IlMkNUaG91c2FuZHMlMjBvZiUyMG5ldXJvbnMlMkNNYWNoaW5lJTIwbGVhcm5pbmclMkNUb29scw== " data-listing-date-sort ="1698796800000 " data-listing-file-modified-sort ="1781694234221 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="255 ">
500500< div class ="thumbnail "> < a href ="../research/posts/facemap.html " class ="no-external ">
501501
502502< img loading ="lazy " src ="https://raw.githubusercontent.com/MouseLand/facemap/main/facemap/mouse.png " class ="thumbnail-image " alt ="facemap ">
@@ -532,7 +532,7 @@ <h3 class="no-anchor listing-title">
532532</ a >
533533</ div >
534534</ div >
535- < div class ="quarto-post image-right " data-index ="9 " data-categories ="U2VnbWVudGF0aW9uJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1667779200000 " data-listing-file-modified-sort ="1781694128611 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="597 ">
535+ < div class ="quarto-post image-right " data-index ="9 " data-categories ="U2VnbWVudGF0aW9uJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1667779200000 " data-listing-file-modified-sort ="1781694234221 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="597 ">
536536< div class ="thumbnail "> < a href ="../research/posts/cellpose2.html " class ="no-external ">
537537
538538< img loading ="lazy " src ="../research/posts/images/cellpose2_cover.png " class ="thumbnail-image " alt ="retrained network vs original cellpose network on fluorescence and live cell image. ">
@@ -566,7 +566,7 @@ <h3 class="no-anchor listing-title">
566566</ a >
567567</ div >
568568</ div >
569- < div class ="quarto-post image-right " data-index ="10 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3I= " data-listing-date-sort ="1651708800000 " data-listing-file-modified-sort ="1781694128718 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="1 " data-listing-word-count-sort ="149 ">
569+ < div class ="quarto-post image-right " data-index ="10 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3I= " data-listing-date-sort ="1651708800000 " data-listing-file-modified-sort ="1781694234317 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="1 " data-listing-word-count-sort ="149 ">
570570< div class ="thumbnail "> < a href ="../research/posts/notso.html " class ="no-external ">
571571
572572< img loading ="lazy " src ="../research/posts/images/ns_cover.jpg " class ="thumbnail-image " alt ="dimensionality of spontaneous activity increases across development, becomes more related to neural activity, and orthogonal to stimulus-driven activity. ">
@@ -598,7 +598,7 @@ <h3 class="no-anchor listing-title">
598598</ a >
599599</ div >
600600</ div >
601- < div class ="quarto-post image-right " data-index ="11 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25z " data-listing-date-sort ="1635724800000 " data-listing-file-modified-sort ="1781694128611 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="598 ">
601+ < div class ="quarto-post image-right " data-index ="11 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25z " data-listing-date-sort ="1635724800000 " data-listing-file-modified-sort ="1781694234221 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="598 ">
602602< div class ="thumbnail "> < a href ="../research/posts/highprecision.html " class ="no-external ">
603603
604604< img loading ="lazy " src ="../research/posts/images/hp_cover2.jpg " class ="thumbnail-image " alt ="highly precise encoding of visual stimuli ">
@@ -630,7 +630,7 @@ <h3 class="no-anchor listing-title">
630630</ a >
631631</ div >
632632</ div >
633- < div class ="quarto-post image-right " data-index ="12 " data-categories ="U2VnbWVudGF0aW9uJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1609459200000 " data-listing-file-modified-sort ="1781694128611 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="393 ">
633+ < div class ="quarto-post image-right " data-index ="12 " data-categories ="U2VnbWVudGF0aW9uJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1609459200000 " data-listing-file-modified-sort ="1781694234221 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="2 " data-listing-word-count-sort ="393 ">
634634< div class ="thumbnail "> < a href ="../research/posts/cellpose.html " class ="no-external ">
635635
636636< img loading ="lazy " src ="../research/posts/images/cellpose_cover.png " class ="thumbnail-image ">
@@ -664,7 +664,7 @@ <h3 class="no-anchor listing-title">
664664</ a >
665665</ div >
666666</ div >
667- < div class ="quarto-post image-right " data-index ="13 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25z " data-listing-date-sort ="1559347200000 " data-listing-file-modified-sort ="1781694128611 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="5 " data-listing-word-count-sort ="829 ">
667+ < div class ="quarto-post image-right " data-index ="13 " data-categories ="VmlzaW9uJTJDVGhvdXNhbmRzJTIwb2YlMjBuZXVyb25z " data-listing-date-sort ="1559347200000 " data-listing-file-modified-sort ="1781694234221 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="5 " data-listing-word-count-sort ="829 ">
668668< div class ="thumbnail "> < a href ="../research/posts/highdim.html " class ="no-external ">
669669
670670< img loading ="lazy " src ="../research/posts/images/hd_cover.png " class ="thumbnail-image " alt ="neural activity reconstructed from subsets of principal components, and sorted by rastermap ">
@@ -696,7 +696,7 @@ <h3 class="no-anchor listing-title">
696696</ a >
697697</ div >
698698</ div >
699- < div class ="quarto-post image-right " data-index ="14 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3IlMkNNYWNoaW5lJTIwbGVhcm5pbmc= " data-listing-date-sort ="1557014400000 " data-listing-file-modified-sort ="1781694128718 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="4 " data-listing-word-count-sort ="700 ">
699+ < div class ="quarto-post image-right " data-index ="14 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDQmVoYXZpb3IlMkNNYWNoaW5lJTIwbGVhcm5pbmc= " data-listing-date-sort ="1557014400000 " data-listing-file-modified-sort ="1781694234317 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="4 " data-listing-word-count-sort ="700 ">
700700< div class ="thumbnail "> < a href ="../research/posts/spontaneous.html " class ="no-external ">
701701
702702< img loading ="lazy " src ="../research/posts/images/spont_cover.jpeg " class ="thumbnail-image " alt ="neural activity predicted from the principal components of mouse face motion ">
@@ -730,7 +730,7 @@ <h3 class="no-anchor listing-title">
730730</ a >
731731</ div >
732732</ div >
733- < div class ="quarto-post image-right " data-index ="15 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDU2VnbWVudGF0aW9uJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1472688000000 " data-listing-file-modified-sort ="1781694128718 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="1 " data-listing-word-count-sort ="141 ">
733+ < div class ="quarto-post image-right " data-index ="15 " data-categories ="VGhvdXNhbmRzJTIwb2YlMjBuZXVyb25zJTJDU2VnbWVudGF0aW9uJTJDTWFjaGluZSUyMGxlYXJuaW5nJTJDVG9vbHM= " data-listing-date-sort ="1472688000000 " data-listing-file-modified-sort ="1781694234317 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="1 " data-listing-word-count-sort ="141 ">
734734< div class ="thumbnail "> < a href ="../research/posts/suite2p.html " class ="no-external ">
735735
736736< img loading ="lazy " src ="../research/posts/images/suite2p_cover.jpg " class ="thumbnail-image " alt ="neuron traces and masks ">
@@ -766,7 +766,7 @@ <h3 class="no-anchor listing-title">
766766</ a >
767767</ div >
768768</ div >
769- < div class ="quarto-post image-right " data-index ="16 " data-categories ="TmV1cmFsJTIwbW9kZWxpbmclMkNCZWhhdmlvcg== " data-listing-date-sort ="1462060800000 " data-listing-file-modified-sort ="1781694128718 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="463 ">
769+ < div class ="quarto-post image-right " data-index ="16 " data-categories ="TmV1cmFsJTIwbW9kZWxpbmclMkNCZWhhdmlvcg== " data-listing-date-sort ="1462060800000 " data-listing-file-modified-sort ="1781694234317 " data-listing-date-modified-sort ="NaN " data-listing-reading-time-sort ="3 " data-listing-word-count-sort ="463 ">
770770< div class ="thumbnail "> < a href ="../research/posts/inhibitory.html " class ="no-external ">
771771
772772< img loading ="lazy " src ="../research/posts/images/inh_cover.jpg " class ="thumbnail-image " alt ="neuronal network simulations fit to neural population activity ">
0 commit comments