diff --git a/pyproject.toml b/pyproject.toml index 04f7bf7..f98ca51 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta" [project] name = "gemcat" -version = "1.4.0" +version = "1.4.1" description = "A toolbox for gene expression-based prediction of metabolic alterations" keywords = ["python", "bioinformatics", "modeling", "metabolites", "omics"] diff --git a/src/gemcat/expression.py b/src/gemcat/expression.py index 06c7a75..e810655 100644 --- a/src/gemcat/expression.py +++ b/src/gemcat/expression.py @@ -229,7 +229,11 @@ def eval_single_gpr( """ if len(gpr) == 0: return np.nan - result = parse_expr(gpr, {"geomean": geomean}) + try: + result = parse_expr(gpr, {"geomean": geomean}) + except SyntaxError: + logging.debug("Parsing failed for: %s", gpr) + return np.nan try: return float(result) except TypeError: