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assay %in% SeuratObject::Assays(x) is not TRUE #111

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@628511miao

I am performing SPOTlight and I am getting this error:
#res <- SPOTlight(

  • x = sce1,
  • y = stRNA,
  • groups = sce$t_group,
  • mgs = mgs_df,
  • hvg = hvg,
  • weight_id = "mean.AUC",
  • group_id = "cluster",
  • gene_id = "gene")
    Error in .extract_counts(y, assay, slot) :
    assay %in% SeuratObject::Assays(x) is not TRUE

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