Hi, thanks for the package!
I am a little bit confused regarding the versions used. I can see version 2.2.0 on Bioc, version 2.0.0 is installed if I call BiocManager::install("sccomp") directly, whereas version 2.1.20 is installed if I call devtools::install_github("MangiolaLaboratory/sccomp").
Everything works with the older version (github), however seems to encounter 'Error in gzfile(file, mode) : cannot open the connection sccomp' when I try to run sccomp_estimate example (with counts object provided by the package).
Am I doing something wrong? Using R version 4.5.1 and cmdstan version 2.37.0
Regards,
Vadim
Hi, thanks for the package!
I am a little bit confused regarding the versions used. I can see version 2.2.0 on Bioc, version 2.0.0 is installed if I call BiocManager::install("sccomp") directly, whereas version 2.1.20 is installed if I call devtools::install_github("MangiolaLaboratory/sccomp").
Everything works with the older version (github), however seems to encounter 'Error in gzfile(file, mode) : cannot open the connection sccomp' when I try to run sccomp_estimate example (with counts object provided by the package).
Am I doing something wrong? Using R version 4.5.1 and cmdstan version 2.37.0
Regards,
Vadim