NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(print,decontam_qc)
S3method(print,decontam_sensitivity)
export(calculate_prevalence_enrichment)
export(filter_phyloseq_at_threshold)
export(get_abundance_prevalence)
export(plot_decontam_scores)
export(plot_flagged_taxa_reads)
export(plot_prevalence_enrichment)
export(plot_sample_read_retention)
export(plot_taxa_reads_before_after)
export(plot_threshold_sensitivity)
export(run_decontam_qc)
export(run_decontam_threshold_sweep)
export(run_threshold_sweep)
export(split_phyloseq_groups)
export(summarize_control_prevalence)
export(summarize_feature_retention)
export(summarize_flagged_taxa)
export(summarize_library_sizes_by_group)
export(summarize_read_retention)
export(summarize_sample_read_retention)
export(summarize_samples_at_depth)