SimCortex/pyproject.toml at main · Kaveh-Moradkhani/SimCortex · GitHub

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[build-system]
requires = ["setuptools>=77", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "simcortex"
version = "2.0.0"
description = "SimCortex is a modular framework for cortical surface reconstruction."
readme = "README.md"
requires-python = ">=3.10"

license = "Apache-2.0"
license-files = ["LICENSE"]

authors = [
  { name = "Kaveh Moradkhani" },
  { name = "Sylvain Bouix" }
]

classifiers = [
  "Programming Language :: Python :: 3",
  "Programming Language :: Python :: 3 :: Only",
]

dependencies = [
  "typer>=0.12",
  "numpy>=1.24",
  "pandas>=2.0",
  "nibabel>=5.2",
  "hydra-core>=1.3",
  "omegaconf>=2.3",
  "tqdm>=4.66",
  "tensorboard>=2.14",
  "trimesh>=4.0",
  "openpyxl>=3.1",
]

[project.urls]
"Source Code" = "https://github.com/Neuro-iX/SimCortex"
"Lab Page" = "https://github.com/Neuro-iX"

[project.optional-dependencies]
preproc = ["antspyx>=0.6.1"]
seg = ["monai>=1.3"]
initsurf = ["python-fcl"]
deform-metrics = ["python-fcl", "pymeshlab"]
torch = ["torch>=2.0"]

[project.scripts]
simcortex = "simcortex.cli.main:app"

[tool.setuptools]
package-dir = {"" = "src"}
include-package-data = true

[tool.setuptools.packages.find]
where = ["src"]

[tool.setuptools.package-data]
simcortex = [
  "configs/**/*.yaml",
  "utils/critical186LUT.raw.gz",
]