Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
KarchinLab
/
TCRtoolkit
Public
Notifications
You must be signed in to change notification settings
Fork
3
Star
4
Code
Issues
8
Pull requests
3
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Projects
Security and quality
Insights
Actions: KarchinLab/TCRtoolkit
Actions
All workflows
Workflows
build-push-container
build-push-container
Copilot
Copilot
Copilot cloud agent
Copilot cloud agent
Copilot code review
Copilot code review
Nextflow Tests
Nextflow Tests
Show more workflows...
Management
Caches
All workflows
All workflows
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Showing runs from all workflows
will be ignored since log searching is not yet available
175 workflow runs
175 workflow runs
Workflow
Filter by Workflow
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching workflows.
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
Addressing comment on PR #77
Copilot cloud agent
#4:
by
Copilot
AI
5m 10s
copilot/create-reporting-process-plan
copilot/create-reporting-process-plan
5m 10s
Implement channel-based Quarto notebook reporting process
Nextflow Tests
#56:
Pull request
#77
opened by
Copilot
AI
3m 46s
copilot/create-reporting-process-plan
copilot/create-reporting-process-plan
3m 46s
View #77
View workflow file
Running Copilot coding agent
Copilot cloud agent
#3:
by
Copilot
AI
16m 25s
copilot/create-reporting-process-plan
copilot/create-reporting-process-plan
16m 25s
Running Copilot coding agent
Copilot cloud agent
#2:
by
Copilot
AI
4m 7s
copilot/create-reporting-process-plan
copilot/create-reporting-process-plan
4m 7s
Running Copilot coding agent
Copilot cloud agent
#1:
by
Copilot
AI
7m 18s
copilot/quarto-notebooks-implementation-plan
copilot/quarto-notebooks-implementation-plan
7m 18s
Copilot code review
Copilot code review
#7:
by
Copilot
AI
4m 3s
refs/pull/76/head
refs/pull/76/head
4m 3s
Reformatting: Annotate subworkflow, OLGA module, Patient subworkflow
Nextflow Tests
#55:
Pull request
#75
synchronize by
dltamayo
28m 33s
dltamayo-dev
dltamayo-dev
28m 33s
View #75
View workflow file
Copilot code review
Copilot code review
#6:
by
Copilot
AI
5m 55s
refs/pull/75/head
refs/pull/75/head
5m 55s
Reformatting: Annotate subworkflow, OLGA module, Patient subworkflow
Nextflow Tests
#54:
Pull request
#75
opened by
dltamayo
27m 20s
dltamayo-dev
dltamayo-dev
27m 20s
View #75
View workflow file
Reformat OLGA, make GLIPH2 optional
Nextflow Tests
#53:
Pull request
#73
synchronize by
dltamayo
28m 30s
dltamayo-dev
dltamayo-dev
28m 30s
View #73
View workflow file
Reformat OLGA, make GLIPH2 optional
Nextflow Tests
#52:
Pull request
#73
synchronize by
dltamayo
27m 27s
dltamayo-dev
dltamayo-dev
27m 27s
View #73
View workflow file
Reformat OLGA, make GLIPH2 optional
Nextflow Tests
#51:
Pull request
#73
synchronize by
dltamayo
25m 53s
dltamayo-dev
dltamayo-dev
25m 53s
View #73
View workflow file
Reformat OLGA, make GLIPH2 optional
Nextflow Tests
#50:
Pull request
#73
synchronize by
dltamayo
27m 48s
dltamayo-dev
dltamayo-dev
27m 48s
View #73
View workflow file
Copilot code review
Copilot code review
#5:
by
Copilot
AI
16m 1s
refs/pull/73/head
refs/pull/73/head
16m 1s
Reformat OLGA, make GLIPH2 optional
Nextflow Tests
#49:
Pull request
#73
synchronize by
dltamayo
26m 14s
dltamayo-dev
dltamayo-dev
26m 14s
View #73
View workflow file
Reformat OLGA, make GLIPH2 optional
Nextflow Tests
#48:
Pull request
#73
opened by
dltamayo
3m 42s
dltamayo-dev
dltamayo-dev
3m 42s
View #73
View workflow file
Pheno pseudobulk
Nextflow Tests
#47:
Pull request
#71
synchronize by
dltamayo
27m 1s
pheno-pseudobulk
pheno-pseudobulk
27m 1s
View #71
View workflow file
Copilot code review
Copilot code review
#4:
by
Copilot
AI
4m 31s
refs/pull/71/head
refs/pull/71/head
4m 31s
Pheno pseudobulk
Nextflow Tests
#46:
Pull request
#71
synchronize by
KevinMLanderos
27m 16s
pheno-pseudobulk
pheno-pseudobulk
27m 16s
View #71
View workflow file
Pheno pseudobulk
Nextflow Tests
#45:
Pull request
#71
opened by
KevinMLanderos
3m 55s
pheno-pseudobulk
pheno-pseudobulk
3m 55s
View #71
View workflow file
Nextflow Tests
Nextflow Tests
#44:
Manually run by
dimalvovs
27m 27s
main
main
27m 27s
View workflow file
Merge pull request #68 from KarchinLab/dltamayo-dev
build-push-container
#48:
Commit
b862c22
pushed by
dltamayo
9m 52s
main
main
9m 52s
View workflow file
Address Nextflow linting, add param validation, reformatting
Nextflow Tests
#43:
Pull request
#68
synchronize by
dltamayo
25m 39s
dltamayo-dev
dltamayo-dev
25m 39s
View #68
View workflow file
Update docker
build-push-container
#47:
Commit
bfa4f50
pushed by
dltamayo
12m 42s
dltamayo-dev
dltamayo-dev
12m 42s
View #68
View workflow file
Address Nextflow linting, add param validation, reformatting
Nextflow Tests
#42:
Pull request
#68
synchronize by
dltamayo
3m 18s
dltamayo-dev
dltamayo-dev
3m 18s
View #68
View workflow file
Previous
1
2
3
4
5
6
7
Next
You can’t perform that action at this time.