Compatibility to visualize STR in RNAseq

[nepena]

To whom it may concern,

This is not an issue but a question of compatibility, could REViewer be useful to visualize short tandem repeats identified from RNA-seq? I know the only tools available to analyze STR in RNA-seq at the moment are superSTR (https://github.com/bahlolab/superSTR/) and TRHist (https://trhist.gi.k.u-tokyo.ac.jp/). However, these tools can identify reads with STR motifs, which can then be aligned to a custom hg38 reference with regions of interest (such as the HTT gene). The next goal is to properly visualize them in a readable way to validate expansion events. To the best of your knowledge, would REViewer be compatible or do you know of other visualization tools that could work with BAM outputs of RNAseq?

Thank you for your time reading this lengthy post.

Best regards
Noah