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hi there, I am interested in looking at repeat interruptions for example in ATXN2 where there could C->T substitution in the CGT repeat. I can see these pretty clearly in the REViewer plot where there's a line of Ts on the major allele but I was wondering if it is at all possible to extract the SNPs at all from REViewer as a text file or if you would have any suggestions about how to go about this.
hi there, I am interested in looking at repeat interruptions for example in ATXN2 where there could C->T substitution in the CGT repeat. I can see these pretty clearly in the REViewer plot where there's a line of Ts on the major allele but I was wondering if it is at all possible to extract the SNPs at all from REViewer as a text file or if you would have any suggestions about how to go about this.
Thanks for your help,
Stuart