support >2/3D #28
HelenaLCr-universe.yaml
on: pull_request
R-universe testing
/
Build source pkg and vignettes
6m 2s
R-universe testing
/
Build rOpenSci docs site
0s
R-universe testing
/
Bioconductor Checks
3m 27s
Matrix: R-universe testing / linux
Matrix: R-universe testing / macos
Matrix: R-universe testing / wasm
Matrix: R-universe testing / windows
Annotations
8 errors and 3 notices
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R-universe testing / Build source pkg and vignettes:
spatialdataR#L0
Installation OK but failed to build vignettes
* creating vignettes ... ERROR
Setting r-universe rmarkdown theme...
--- re-building ‘SpatialData.Rmd’ using rmarkdown
Loading required package: BiocStyle
Quitting from SpatialData.Rmd:169-184 [data]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `vapply()`:
! values must be length 3,
but FUN(X[[1]]) result is length 0
---
Backtrace:
▆
1. └─base::vapply(l, dim, integer(3))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'SpatialData.Rmd' failed with diagnostics:
values must be length 3,
but FUN(X[[1]]) result is length 0
--- failed re-building ‘SpatialData.Rmd’
SUMMARY: processing the following file failed:
‘SpatialData.Rmd’
Error: Vignette re-building failed.
Execution halted
If this is expected, consider precomputing your vignettes: https://ropensci.org/blog/2019/12/08/precompute-vignettes/
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R-universe testing / Build R-release for MacOS:
spatialdataR#L0
Check: tests, Result: ERROR
Running ‘testthat.R’ [39s/39s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
13. ├─spatialdataR:::multiscales(x)
14. └─spatialdataR:::multiscales(x)
15. └─spatialdataR (local) .local(x, ...)
16. └─spatialdataR:::.zv(x)
── Failure ('test-validity.R:12:5'): validity,SpatialDataImage ─────────────────
Expected `SpatialDataImage(list(a <- array(numeric(1), c(1, 1))))` to throw a error.
── Failure ('test-validity.R:13:41'): validity,SpatialDataImage ────────────────
Expected `validObject(x)` to throw a error.
── Failure ('test-validity.R:23:5'): validity,SpatialDataLabel ─────────────────
Expected `SpatialDataLabel(list(a <- array(integer(1), c(1, 1, 1))))` to throw a error.
[ FAIL 9 | WARN 0 | SKIP 0 | PASS 731 ]
Error:
! Test failures.
Execution halted
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R-universe testing / Build R-oldrel for MacOS:
spatialdataR#L0
Check: tests, Result: ERROR
Running ‘testthat.R’ [46s/47s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
13. ├─spatialdataR:::multiscales(x)
14. └─spatialdataR:::multiscales(x)
15. └─spatialdataR (local) .local(x, ...)
16. └─spatialdataR:::.zv(x)
── Failure ('test-validity.R:12:5'): validity,SpatialDataImage ─────────────────
Expected `SpatialDataImage(list(a <- array(numeric(1), c(1, 1))))` to throw a error.
── Failure ('test-validity.R:13:41'): validity,SpatialDataImage ────────────────
Expected `validObject(x)` to throw a error.
── Failure ('test-validity.R:23:5'): validity,SpatialDataLabel ─────────────────
Expected `SpatialDataLabel(list(a <- array(integer(1), c(1, 1, 1))))` to throw a error.
[ FAIL 9 | WARN 0 | SKIP 0 | PASS 731 ]
Error:
! Test failures.
Execution halted
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R-universe testing / Build R-oldrel for Windows:
spatialdataR#L0
Check: tests, Result: ERROR
Running 'testthat.R' [60s]
Running the tests in 'tests/testthat.R' failed.
Last 13 lines of output:
13. ├─spatialdataR:::multiscales(x)
14. └─spatialdataR:::multiscales(x)
15. └─spatialdataR (local) .local(x, ...)
16. └─spatialdataR:::.zv(x)
── Failure ('test-validity.R:12:5'): validity,SpatialDataImage ─────────────────
Expected `SpatialDataImage(list(a <- array(numeric(1), c(1, 1))))` to throw a error.
── Failure ('test-validity.R:13:41'): validity,SpatialDataImage ────────────────
Expected `validObject(x)` to throw a error.
── Failure ('test-validity.R:23:5'): validity,SpatialDataLabel ─────────────────
Expected `SpatialDataLabel(list(a <- array(integer(1), c(1, 1, 1))))` to throw a error.
[ FAIL 9 | WARN 0 | SKIP 0 | PASS 731 ]
Error:
! Test failures.
Execution halted
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R-universe testing / Build R-devel for Windows:
spatialdataR#L0
Check: tests, Result: ERROR
Running 'testthat.R' [66s]
Running the tests in 'tests/testthat.R' failed.
Last 13 lines of output:
13. ├─spatialdataR:::multiscales(x)
14. └─spatialdataR:::multiscales(x)
15. └─spatialdataR (local) .local(x, ...)
16. └─spatialdataR:::.zv(x)
── Failure ('test-validity.R:12:5'): validity,SpatialDataImage ─────────────────
Expected `SpatialDataImage(list(a <- array(numeric(1), c(1, 1))))` to throw a error.
── Failure ('test-validity.R:13:41'): validity,SpatialDataImage ────────────────
Expected `validObject(x)` to throw a error.
── Failure ('test-validity.R:23:5'): validity,SpatialDataLabel ─────────────────
Expected `SpatialDataLabel(list(a <- array(integer(1), c(1, 1, 1))))` to throw a error.
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 731 ]
Error:
! Test failures.
Execution halted
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R-universe testing / Build R-release for Windows:
spatialdataR#L0
Check: tests, Result: ERROR
Running 'testthat.R' [68s]
Running the tests in 'tests/testthat.R' failed.
Last 13 lines of output:
13. ├─spatialdataR:::multiscales(x)
14. └─spatialdataR:::multiscales(x)
15. └─spatialdataR (local) .local(x, ...)
16. └─spatialdataR:::.zv(x)
── Failure ('test-validity.R:12:5'): validity,SpatialDataImage ─────────────────
Expected `SpatialDataImage(list(a <- array(numeric(1), c(1, 1))))` to throw a error.
── Failure ('test-validity.R:13:41'): validity,SpatialDataImage ────────────────
Expected `validObject(x)` to throw a error.
── Failure ('test-validity.R:23:5'): validity,SpatialDataLabel ─────────────────
Expected `SpatialDataLabel(list(a <- array(integer(1), c(1, 1, 1))))` to throw a error.
[ FAIL 9 | WARN 0 | SKIP 0 | PASS 731 ]
Error:
! Test failures.
Execution halted
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R-universe testing / Build R-release for Linux:
spatialdataR#L0
Check: tests, Result: ERROR
Running ‘testthat.R’ [47s/45s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
13. ├─spatialdataR:::multiscales(x)
14. └─spatialdataR:::multiscales(x)
15. └─spatialdataR (local) .local(x, ...)
16. └─spatialdataR:::.zv(x)
── Failure ('test-validity.R:12:5'): validity,SpatialDataImage ─────────────────
Expected `SpatialDataImage(list(a <- array(numeric(1), c(1, 1))))` to throw a error.
── Failure ('test-validity.R:13:41'): validity,SpatialDataImage ────────────────
Expected `validObject(x)` to throw a error.
── Failure ('test-validity.R:23:5'): validity,SpatialDataLabel ─────────────────
Expected `SpatialDataLabel(list(a <- array(integer(1), c(1, 1, 1))))` to throw a error.
[ FAIL 9 | WARN 0 | SKIP 0 | PASS 731 ]
Error:
! Test failures.
Execution halted
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R-universe testing / Build R-devel for Linux:
spatialdataR#L0
Check: tests, Result: ERROR
Running ‘testthat.R’ [55s/53s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
13. ├─spatialdataR:::multiscales(x)
14. └─spatialdataR:::multiscales(x)
15. └─spatialdataR (local) .local(x, ...)
16. └─spatialdataR:::.zv(x)
── Failure ('test-validity.R:12:5'): validity,SpatialDataImage ─────────────────
Expected `SpatialDataImage(list(a <- array(numeric(1), c(1, 1))))` to throw a error.
── Failure ('test-validity.R:13:41'): validity,SpatialDataImage ────────────────
Expected `validObject(x)` to throw a error.
── Failure ('test-validity.R:23:5'): validity,SpatialDataLabel ─────────────────
Expected `SpatialDataLabel(list(a <- array(integer(1), c(1, 1, 1))))` to throw a error.
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 731 ]
Error:
! Test failures.
Execution halted
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R-universe testing / Build R-oldrel for Windows
NOTICE: windows-2025 requests are being redirected to windows-2025-vs2026 by June 15, 2026
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R-universe testing / Build R-devel for Windows
NOTICE: windows-2025 requests are being redirected to windows-2025-vs2026 by June 15, 2026
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R-universe testing / Build R-release for Windows
NOTICE: windows-2025 requests are being redirected to windows-2025-vs2026 by June 15, 2026
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