I recently wrote a free gating app that works natively with cytof data (and flow data too)
You can upload a comp matrix, and perform debarcoding.
MIT license. Freely accessible on web, or install locally. Works inside (GateLabR) or outside of R (GateLab).
https://david-priest.github.io/GateLab/
https://github.com/david-priest/GateLabR
Sorry for the somewhat advertising post. Posting here because hopefully it will be of use to CATALYST users looking for a free alternative to cytobank (GateLab works with Gating ML 2.0).
Thanks to the Catalyst team for your great package and the help you've provided over the years.
David Priest,
CiDER, The University of Osaka.
I recently wrote a free gating app that works natively with cytof data (and flow data too)
You can upload a comp matrix, and perform debarcoding.
MIT license. Freely accessible on web, or install locally. Works inside (GateLabR) or outside of R (GateLab).
https://david-priest.github.io/GateLab/
https://github.com/david-priest/GateLabR
Sorry for the somewhat advertising post. Posting here because hopefully it will be of use to CATALYST users looking for a free alternative to cytobank (GateLab works with Gating ML 2.0).
Thanks to the Catalyst team for your great package and the help you've provided over the years.
David Priest,
CiDER, The University of Osaka.