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Bug: HDF5 files corrupted by KeyboardInterrupt #32

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@Harrison-Oatman

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Hard-closing the program corrupts hdf5 binaries, making them unreadable by h5viewer or convert_hdf5s.py.

If h5 files are never closed when the program quits unexpectedly, the files may become unreadable. H5 files should always close before the program is terminated.

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