Skip to content

Major feature: Experiment viewer #12

Description

@Harrison-Oatman

Objective:

Create an interactive GUI to view in-progress or completed multi-experiments

Short term - this should be a minimal interface without advanced features

Features:

  • The GUI should be a standalone interface that can load data whether or not PyCLM is running
    • Consequently, the PyCLM directories must contain sufficient information
  • Select experiments, pick a channel, and choose whether to overlay the pattern/segmentation at the timepoint
    • Should also be able to normalize intensity by a set minimum and maximum
  • View details about acquisition as contained in hdf5
  • Updates as acquisitions are saved to disk
  • Export image sequence as .tif

Constraints:

  • Limit memory usage: the GUI should not have all imaging data in memory.
  • PyCLM processes should not depend on the state of the GUI
  • The GUI should not interfere with PyCLM data-writing

Metadata

Metadata

Assignees

Labels

enhancementNew feature or request

Projects

No projects

Relationships

None yet

Development

No branches or pull requests

Issue actions