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# Generated by roxygen2: do not edit by hand
S3method(print,bg_project_diagnosis)
S3method(print,bg_project_doctor)
S3method(print,bg_project_inspection)
S3method(print,bg_project_plan)
S3method(print,bg_project_run)
S3method(print,bg_project_validation)
S3method(print,bg_run_jobs)
S3method(print,bg_run_provenance)
S3method(summary,bg_project_cfg)
S3method(summary,bg_project_inspection)
S3method(summary,bg_status_df)
export(add_tracked_job_parent)
export(automask)
export(butterworth_filter_4d)
export(calculate_motion_outliers)
export(cancel_project_run)
export(cluster_job_submit)
export(construct_bids_filename)
export(construct_bids_regex)
export(derive_reference_core)
export(diagnose_pipeline)
export(diagnose_project)
export(doctor)
export(doctor_project)
export(edit_project)
export(extract_bids_info)
export(extract_rois)
export(filtfilt_cpp)
export(find_run_logs)
export(get_fmriprep_outputs)
export(get_postproc_output_files)
export(get_project_runs)
export(get_project_status)
export(get_run_jobs)
export(get_run_provenance)
export(get_subject_status)
export(get_tracked_job_status)
export(getline)
export(image_quantile)
export(initialize_project)
export(insert_tracked_job)
export(inspect_project)
export(lmfit_residuals_4d)
export(load_project)
export(natural_spline_4d)
export(natural_spline_interp)
export(parse_cli_args)
export(plan_project)
export(postprocess_subject)
export(read_project_plan)
export(remove_nifti_volumes)
export(resample_template_to_img)
export(retry_project_run)
export(run_bids_validation)
export(run_fsl_command)
export(run_project)
export(setup_project)
export(submit_project_plan)
export(update_tracked_job_status)
export(validate_project_config)
export(wait_for_job)
export(write_project_config)
export(write_project_plan)
import(RNifti)
importFrom(DBI,dbBegin)
importFrom(DBI,dbCommit)
importFrom(DBI,dbConnect)
importFrom(DBI,dbDataType)
importFrom(DBI,dbDisconnect)
importFrom(DBI,dbExecute)
importFrom(DBI,dbExistsTable)
importFrom(DBI,dbGetQuery)
importFrom(DBI,dbIsValid)
importFrom(DBI,dbRollback)
importFrom(RNifti,asNifti)
importFrom(RNifti,readNifti)
importFrom(RNifti,writeNifti)
importFrom(RSQLite,SQLite)
importFrom(RSQLite,sqliteSetBusyHandler)
importFrom(Rcpp,sourceCpp)
importFrom(checkmate,assert_character)
importFrom(checkmate,assert_choice)
importFrom(checkmate,assert_class)
importFrom(checkmate,assert_data_frame)
importFrom(checkmate,assert_directory_exists)
importFrom(checkmate,assert_file_exists)
importFrom(checkmate,assert_flag)
importFrom(checkmate,assert_integerish)
importFrom(checkmate,assert_list)
importFrom(checkmate,assert_logical)
importFrom(checkmate,assert_names)
importFrom(checkmate,assert_number)
importFrom(checkmate,assert_numeric)
importFrom(checkmate,assert_string)
importFrom(checkmate,assert_subset)
importFrom(checkmate,test_character)
importFrom(checkmate,test_class)
importFrom(checkmate,test_directory_exists)
importFrom(checkmate,test_file_exists)
importFrom(checkmate,test_integerish)
importFrom(checkmate,test_list)
importFrom(checkmate,test_null)
importFrom(checkmate,test_number)
importFrom(checkmate,test_string)
importFrom(checkmate,test_true)
importFrom(cli,cli_alert_info)
importFrom(cli,cli_alert_success)
importFrom(cli,cli_alert_warning)
importFrom(data.table,fread)
importFrom(data.table,fwrite)
importFrom(data.table,setnames)
importFrom(data.tree,Node)
importFrom(filelock,lock)
importFrom(filelock,unlock)
importFrom(glue,glue)
importFrom(glue,glue_sql)
importFrom(jsonlite,fromJSON)
importFrom(jsonlite,toJSON)
importFrom(lgr,AppenderConsole)
importFrom(lgr,AppenderFile)
importFrom(lgr,get_logger)
importFrom(lgr,get_logger_glue)
importFrom(lubridate,day)
importFrom(lubridate,dhours)
importFrom(lubridate,hour)
importFrom(lubridate,minute)
importFrom(lubridate,parse_date_time)
importFrom(lubridate,second)
importFrom(lubridate,seconds_to_period)
importFrom(matrixStats,rowAnys)
importFrom(reticulate,py_install)
importFrom(reticulate,py_module_available)
importFrom(reticulate,source_python)
importFrom(signal,butter)
importFrom(signal,sgolayfilt)
importFrom(stats,mad)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,setNames)
importFrom(stats,splinefun)
importFrom(tools,file_path_sans_ext)
importFrom(utils,head)
importFrom(utils,menu)
importFrom(utils,modifyList)
importFrom(utils,read.table)
importFrom(utils,select.list)
importFrom(utils,tail)
importFrom(utils,type.convert)
importFrom(yaml,read_yaml)
importFrom(yaml,write_yaml)
useDynLib(BrainGnomes, .registration = TRUE)