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detectPanel 0.1.3

Changes

  • Added method references to the Description field using author-year and DOI format.
  • Added small executable examples for all exported functions and removed an unnecessary \dontrun{} wrapper.
  • Kept \donttest{} only for the optional DESeq2 example and made its example metadata explicit factors.
  • Enabled execution of the nested-validation vignette example.
  • Made the test runner skip cleanly when the suggested testthat package is unavailable.

detectPanel 0.1.2

Changes

  • Pre-built vignette output included in the source tarball (inst/doc).
  • Added spelling whitelist (inst/WORDLIST) for CRAN incoming checks.
  • Excluded local working directories from the package tarball.

detectPanel 0.1.1

Changes

  • Added unit tests covering export, DESeq2 differential-expression, end-to-end discovery, and boundary/error cases.
  • Added full MIT license text (LICENSE.md) and .Rbuildignore.

detectPanel 0.1.0

Initial release

detectPanel provides a leakage-aware workflow for discovery and validation of small biomarker panels.

Features

  • Detectability-aware feature filtering.
  • Small-panel search with nested cross-validation.
  • Repeated stratified resampling utilities.
  • Logistic panel fitting with automatic L2-penalized fallback for unstable or separation-prone fits.
  • Prediction support for fitted detectPanel_result objects.
  • Panel and feature selection-frequency summaries.
  • Export and visualization utilities.

Validation

The package is covered by simulated-data tests and unit tests, including nested-validation, model-fitting, prediction, resampling, and plotting workflows. Release candidates are checked with R CMD check --as-cran.