detectPanel/NAMESPACE at main · Emr-27/detectPanel · GitHub

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export(predict.detectPanel_result)
export(detectPanel)
export(confusion_metrics)
export(discover_panel)
export(evaluate_markers)
export(exclude_features)
export(export_results)
export(fit_panel)
export(flag_pca_outliers)
export(make_repeated_stratified_splits)
export(nested_validate_panels)
export(plot_marker_expression)
export(plot_marker_roc)
export(plot_panel_heatmap)
export(plot_volcano)
export(preselect_markers)
export(run_deseq2)
export(score_detectability)
export(search_panels)
export(transform_assay)
export(validate_assay_data)
S3method(plot,detectPanel_nested)
S3method(plot,detectPanel_result)
S3method(coef,detectPanel_ridge_fit)
S3method(predict,detectPanel_ridge_fit)
S3method(predict,detectPanel_fit)
S3method(print,detectPanel_fit)
S3method(print,detectPanel_nested)
S3method(print,detectPanel_result)
S3method(print,detectPanel_search)
S3method(summary,detectPanel_fit)
S3method(summary,detectPanel_nested)
S3method(summary,detectPanel_result)
importFrom(ggplot2,aes)
importFrom(ggplot2,coord_equal)
importFrom(ggplot2,geom_abline)
importFrom(ggplot2,geom_col)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,theme_bw)
importFrom(graphics,plot)
importFrom(stats,aggregate)
importFrom(stats,binomial)
importFrom(stats,coef)
importFrom(stats,glm)
importFrom(stats,median)
importFrom(stats,predict)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(utils,combn)
importFrom(utils,head)
importFrom(utils,write.csv)

S3method(predict,detectPanel_result)