From 803e9b2ee6fdbd7207570005b659fe3f00f9d1a8 Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 15:03:06 +1000 Subject: [PATCH 01/22] feat(regression): add ilamb cmip6 baselines for mrsos/gpp/lai First batch of Framework-B committed baselines for ILAMB, covering the mrsos-wangmao, gpp-fluxnet2015 and lai-avh15c1 cmip6 test cases. Native blobs are not yet minted (native={}); the gated mint workflow populates them and is the vehicle for validating CI/local committed-bundle consistency. --- .../gpp-fluxnet2015/cmip6/catalog.yaml | 131 + .../gpp-fluxnet2015/cmip6/manifest.json | 11 + .../cmip6/regression/diagnostic.json | 121 + .../cmip6/regression/output.json | 244 + .../cmip6/regression/series.json | 2382 +++++++++ .../test-data/lai-avh15c1/cmip6/catalog.yaml | 130 + .../test-data/lai-avh15c1/cmip6/manifest.json | 11 + .../cmip6/regression/diagnostic.json | 121 + .../lai-avh15c1/cmip6/regression/output.json | 244 + .../lai-avh15c1/cmip6/regression/series.json | 3346 +++++++++++++ .../mrsos-wangmao/cmip6/catalog.yaml | 170 + .../mrsos-wangmao/cmip6/manifest.json | 11 + .../cmip6/regression/diagnostic.json | 121 + .../cmip6/regression/output.json | 244 + .../cmip6/regression/series.json | 4402 +++++++++++++++++ 15 files changed, 11689 insertions(+) create mode 100644 packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml create mode 100644 packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/regression/diagnostic.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/regression/output.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/regression/series.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/catalog.yaml create mode 100644 packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/regression/diagnostic.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/regression/output.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/regression/series.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/catalog.yaml create mode 100644 packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/diagnostic.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/output.json create mode 100644 packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/series.json diff --git a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml new file mode 100644 index 000000000..677811580 --- /dev/null +++ b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml @@ -0,0 +1,131 @@ +_metadata: + hash: 91e6801291efa5bde29cbe451e1246a2281992fe +cmip6: + slug_column: instance_id + selector: + experiment_id: historical + grid_label: gn + member_id: r1i1p1f1 + source_id: CanESM5 + datasets: + - activity_id: CMIP + branch_method: Spin-up documentation + branch_time_in_child: 0.0 + branch_time_in_parent: 1223115.0 + calendar: 365_day + end_time: '2014-12-16 12:00:00' + experiment: all-forcing simulation of the recent past + experiment_id: historical + filename: gpp_Lmon_CanESM5_historical_r1i1p1f1_gn_185001-201412.nc + finalised: true + frequency: mon + grid: T63L49 native atmosphere, T63 Linear Gaussian Grid; 128 x 64 longitude/latitude; + 49 levels; top level 1 hPa + grid_label: gn + instance_id: CMIP6.CMIP.CCCma.CanESM5.historical.r1i1p1f1.Lmon.gpp.gn.v20190429 + institution_id: CCCma + long_name: Carbon Mass Flux out of Atmosphere Due to Gross Primary Production + on Land + member_id: r1i1p1f1 + nominal_resolution: 500 km + parent_activity_id: CMIP + parent_experiment_id: piControl + parent_source_id: CanESM5 + parent_time_units: days since 1850-01-01 0:0:0.0 + parent_variant_label: r1i1p1f1 + product: model-output + 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institution_id: CCCma + long_name: Grid-Cell Area for Atmospheric Grid Variables + member_id: r1i1p1f1 + nominal_resolution: 500 km + parent_activity_id: CMIP + parent_experiment_id: piControl + parent_source_id: CanESM5 + parent_time_units: days since 1850-01-01 0:0:0.0 + parent_variant_label: r1i1p1f1 + product: model-output + realm: atmos + source_id: CanESM5 + source_type: AOGCM + standard_name: cell_area + start_time: null + sub_experiment: none + sub_experiment_id: none + table_id: fx + time_range: null + time_units: null + units: m2 + variable_id: areacella + variant_label: r1i1p1f1 + version: v20190429 + vertical_levels: 1 + - activity_id: CMIP + branch_method: Spin-up documentation + branch_time_in_child: 0.0 + branch_time_in_parent: 1223115.0 + calendar: null + end_time: null + experiment: all-forcing simulation of the recent past + experiment_id: historical + filename: sftlf_fx_CanESM5_historical_r1i1p1f1_gn.nc + finalised: true + frequency: fx + grid: T63L49 native 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0.20571506144991836, + 0.19647308296392704, + 0.1987395565336728, + 0.21500143055458812, + 0.22459264581997868 + ] + } +] \ No newline at end of file From 2b5bdd8b9493f0f77fcb89f517fc7e289a7dfbe2 Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 15:04:25 +1000 Subject: [PATCH 02/22] docs(changelog): add fragment for ilamb cmip6 baselines --- changelog/738.feature.md | 1 + 1 file changed, 1 insertion(+) create mode 100644 changelog/738.feature.md diff --git a/changelog/738.feature.md b/changelog/738.feature.md new file mode 100644 index 000000000..aac39c619 --- /dev/null +++ b/changelog/738.feature.md @@ -0,0 +1 @@ +ILAMB regression baselines are migrated to the per-package Framework B layout, starting with the `mrsos-wangmao`, `gpp-fluxnet2015` and `lai-avh15c1` cmip6 test cases. Each carries a committed CMEC bundle and a manifest; native blobs are published separately through the gated mint workflow. From 915a328b037594ccfd6adf5e056eb79f16d1740f Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 15:22:18 +1000 Subject: [PATCH 03/22] test(ilamb): skip offline validate when native lives in the store --- .../tests/integration/test_diagnostics.py | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/packages/climate-ref-ilamb/tests/integration/test_diagnostics.py b/packages/climate-ref-ilamb/tests/integration/test_diagnostics.py index 51e5af48c..f296adc58 100644 --- a/packages/climate-ref-ilamb/tests/integration/test_diagnostics.py +++ b/packages/climate-ref-ilamb/tests/integration/test_diagnostics.py @@ -89,6 +89,14 @@ def test_validate_test_case_regression( test_data_dir=provider_test_data_dir, ) + # TODO: remove this once we have migrated test cases to use the committed bundles. + # Under Framework B the native baselines live in the object store, not the repo, so + # build_execution_result cannot be replayed from the committed bundle alone. The + # online equivalent (`ref test-cases replay`) materialises native blobs from the + # store; this offline test skips until that path is shared here. + if not any(paths.regression.glob("*.nc")): + pytest.skip(f"No committed native baseline for {diagnostic.slug}/{test_case_name}") + definition = validator.load_regression_definition(tmp_path / diagnostic.slug / test_case_name) validator.validate(definition) From fa0cf92c0251d3a6980c98e169376b9a807fd5e1 Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 15:51:48 +1000 Subject: [PATCH 04/22] ci(regression): scope mint fetch to the dispatched diagnostic/test case --- .github/workflows/regression-mint.yaml | 11 ++++++++++- 1 file changed, 10 insertions(+), 1 deletion(-) diff --git a/.github/workflows/regression-mint.yaml b/.github/workflows/regression-mint.yaml index b6dd8f582..98f17d875 100644 --- a/.github/workflows/regression-mint.yaml +++ b/.github/workflows/regression-mint.yaml @@ -69,7 +69,16 @@ jobs: - name: Restore test-case catalog paths env: PROVIDER: ${{ inputs.provider }} - run: uv run ref test-cases fetch --provider "${PROVIDER}" || echo "::warning::test-case fetch incomplete" + DIAGNOSTIC: ${{ inputs.diagnostic }} + TEST_CASE: ${{ inputs.test_case }} + run: | + # Scope the fetch to the dispatched diagnostic/test case so a single-case + # mint does not re-fetch every case for the provider (cmip7 cases in + # particular can stall on ESGF). Mirrors the mint step's argument handling. + args=(--provider "${PROVIDER}") + if [ -n "${DIAGNOSTIC}" ]; then args+=(--diagnostic "${DIAGNOSTIC}"); fi + if [ -n "${TEST_CASE}" ]; then args+=(--test-case "${TEST_CASE}"); fi + uv run ref test-cases fetch "${args[@]}" || echo "::warning::test-case fetch incomplete" - name: Verify store credentials env: REF_NATIVE_STORE_ACCESS_KEY_ID: ${{ secrets.R2_ACCESS_KEY_ID }} From 8d90c20d57398e4c14f1b5ce252d5bd95cb65981 Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 16:34:11 +1000 Subject: [PATCH 05/22] ci(regression): provision provider reference data before minting --- .github/workflows/regression-mint.yaml | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/.github/workflows/regression-mint.yaml b/.github/workflows/regression-mint.yaml index 98f17d875..8b8e67c8c 100644 --- a/.github/workflows/regression-mint.yaml +++ b/.github/workflows/regression-mint.yaml @@ -66,6 +66,14 @@ jobs: python-version: "3.13" - name: Fetch sample data run: uv run ref datasets fetch-sample-data + - name: Set up provider (environment + reference data) + env: + PROVIDER: ${{ inputs.provider }} + # Provisions the provider's conda environment (where applicable) and its + # reference-data registries. ILAMB/PMP/ESMValTool diagnostics read observational + # reference data that is not part of the ESGF model fetch above; without this the + # diagnostic fails to open its reference files during the mint run. + run: uv run ref providers setup --provider "${PROVIDER}" - name: Restore test-case catalog paths env: PROVIDER: ${{ inputs.provider }} From 7e4ff0c393ee666b97b84ce26d3277e4fd3761e8 Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 18 Jun 2026 06:40:40 +0000 Subject: [PATCH 06/22] chore(regression): mint native baselines for ilamb --- .../mrsos-wangmao/cmip6/manifest.json | 89 +- .../cmip6/regression/diagnostic.json | 14 +- .../cmip6/regression/output.json | 144 +- .../cmip6/regression/series.json | 5920 ++++++++--------- 4 files changed, 3124 insertions(+), 3043 deletions(-) diff --git a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json index fbba21e99..765e3af7b 100644 --- a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json @@ -1,11 +1,92 @@ { "catalog_hash": "025613ab823b9baff0783a2ff518d8a1256e0aba", "committed": { - "diagnostic.json": "8097cc52f9af7c96846cb185940bae078b460b51fd7864380f0b7fb95e6e519d", - "output.json": "6974c126a1412b410b6421a865f56618e686ea5b692363f672e197cdf819fdd5", - "series.json": "d48cf7d142b4ff0b59dc5cd2067f06300b9c58eefa167aa5bc157b5be2f07958" + "diagnostic.json": "39fa24067750a57d1e0b8839b39834cc44b270f3b99f593b0ff6edf4777e0d06", + "output.json": "44164117d217aeaceb70ff5304f30b7f4aa64328fa4ec06ca26cde516966fd5b", + "series.json": "11b858547a550f8a013a08b5e93b563af36618bab0e9d967b4e689a2c12c743b" + }, + "native": { + "CanESM5_global_bias.png": { + "sha256": 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a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/diagnostic.json +++ b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/diagnostic.json @@ -84,17 +84,17 @@ "global": { "Bias": { "Bias": -0.03636304956295, - "Bias Score": 0.2674229808987347, + "Bias Score": 0.2674229808987349, "Period Mean": 0.2821592505851507 }, "RMSE": { - "RMSE": 0.0952554853560104, - "RMSE Score": 0.2016185942405904 + "RMSE": 0.0952554853560105, + "RMSE Score": 0.2016185942405905 }, "Spatial Distribution": { - "Correlation": 0.6982620823089595, + "Correlation": 0.6982620823089615, "Normalized Standard Deviation": 3.6999889319020087, - "Spatial Distribution Score": 0.2154749605233488 + "Spatial Distribution Score": 0.2154749605233491 } }, "tropical": { @@ -108,9 +108,9 @@ "RMSE Score": 0.2338815995715465 }, "Spatial Distribution": { - "Correlation": 0.493609825744379, + "Correlation": 0.4936098257443785, "Normalized Standard Deviation": 1.4673267895257216, - "Spatial Distribution Score": 0.6469336063910497 + "Spatial Distribution Score": 0.6469336063910495 } } } diff --git a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/output.json b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/output.json index ad97bca84..042897208 100644 --- a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/output.json +++ b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/output.json @@ -8,6 +8,30 @@ }, "data": {}, "plots": { + "None_global_taylor.png": { + "filename": "None_global_taylor.png", + "long_name": "The Taylor diagram over the Global - Land region.", + "description": "", + "dimensions": { + "experiment_id": "historical", + "grid_label": "gn", + "member_id": "r1i1p1f1", + "source_id": "CanESM5", + "reference_source_id": "WangMao", + "region": "global", + "statistic": "Taylor diagram" + } + }, + "Reference_global_mean.png": { + "filename": "Reference_global_mean.png", + "long_name": "The period mean for the reference data over the Global - Land region.", + "description": "", + "dimensions": { + "region": "global", + "statistic": "Period Mean", + "source_id": "Reference" + } + }, "CanESM5_tropical_rmse.png": { "filename": "CanESM5_tropical_rmse.png", "long_name": "The RMSE for CanESM5 over the Tropical climates region.", @@ -22,9 +46,9 @@ "statistic": "RMSE" } }, - "CanESM5_tropical_bias.png": { - "filename": "CanESM5_tropical_bias.png", - "long_name": "The bias for CanESM5 over the Tropical climates region.", + "None_tropical_taylor.png": { + "filename": "None_tropical_taylor.png", + "long_name": "The Taylor diagram over the Tropical climates region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -33,12 +57,12 @@ "source_id": "CanESM5", "reference_source_id": "WangMao", "region": "tropical", - "statistic": "Bias" + "statistic": "Taylor diagram" } }, - "CanESM5_global_biasscore.png": { - "filename": "CanESM5_global_biasscore.png", - "long_name": "The bias score for CanESM5 over the Global - Land region.", + "CanESM5_tropical_trace.png": { + "filename": "CanESM5_tropical_trace.png", + "long_name": "The regional mean for CanESM5 over the Tropical climates region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -46,8 +70,8 @@ "member_id": "r1i1p1f1", "source_id": "CanESM5", "reference_source_id": "WangMao", - "region": "global", - "statistic": "Bias score" + "region": "tropical", + "statistic": "Regional mean" } }, "CanESM5_global_bias.png": { @@ -64,9 +88,9 @@ "statistic": "Bias" } }, - "CanESM5_global_rmsescore.png": { - "filename": "CanESM5_global_rmsescore.png", - "long_name": "The RMSE score for CanESM5 over the Global - Land region.", + "CanESM5_global_trace.png": { + "filename": "CanESM5_global_trace.png", + "long_name": "The regional mean for CanESM5 over the Global - Land region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -75,12 +99,12 @@ "source_id": "CanESM5", "reference_source_id": "WangMao", "region": "global", - "statistic": "RMSE score" + "statistic": "Regional mean" } }, - "CanESM5_global_rmse.png": { - "filename": "CanESM5_global_rmse.png", - "long_name": "The RMSE for CanESM5 over the Global - Land region.", + "CanESM5_tropical_bias.png": { + "filename": "CanESM5_tropical_bias.png", + "long_name": "The bias for CanESM5 over the Tropical climates region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -88,8 +112,8 @@ "member_id": "r1i1p1f1", "source_id": "CanESM5", "reference_source_id": "WangMao", - "region": "global", - "statistic": "RMSE" + "region": "tropical", + "statistic": "Bias" } }, "CanESM5_tropical_rmsescore.png": { @@ -106,33 +130,9 @@ "statistic": "RMSE score" } }, - "Reference_global_mean.png": { - "filename": "Reference_global_mean.png", - "long_name": "The period mean for the reference data over the Global - Land region.", - "description": "", - "dimensions": { - "region": "global", - "statistic": "Period Mean", - "source_id": "Reference" - } - }, - "None_tropical_taylor.png": { - "filename": "None_tropical_taylor.png", - "long_name": "The Taylor diagram over the Tropical climates region.", - "description": "", - "dimensions": { - "experiment_id": "historical", - "grid_label": "gn", - "member_id": "r1i1p1f1", - "source_id": "CanESM5", - "reference_source_id": "WangMao", - "region": "tropical", - "statistic": "Taylor diagram" - } - }, - "CanESM5_global_trace.png": { - "filename": "CanESM5_global_trace.png", - "long_name": "The regional mean for CanESM5 over the Global - Land region.", + "CanESM5_global_rmsescore.png": { + "filename": "CanESM5_global_rmsescore.png", + "long_name": "The RMSE score for CanESM5 over the Global - Land region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -141,12 +141,12 @@ "source_id": "CanESM5", "reference_source_id": "WangMao", "region": "global", - "statistic": "Regional mean" + "statistic": "RMSE score" } }, - "CanESM5_tropical_mean.png": { - "filename": "CanESM5_tropical_mean.png", - "long_name": "The period mean for CanESM5 over the Tropical climates region.", + "CanESM5_global_mean.png": { + "filename": "CanESM5_global_mean.png", + "long_name": "The period mean for CanESM5 over the Global - Land region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -154,24 +154,10 @@ "member_id": "r1i1p1f1", "source_id": "CanESM5", "reference_source_id": "WangMao", - "region": "tropical", + "region": "global", "statistic": "Period Mean" } }, - "CanESM5_tropical_trace.png": { - "filename": "CanESM5_tropical_trace.png", - "long_name": "The regional mean for CanESM5 over the Tropical climates region.", - "description": "", - "dimensions": { - "experiment_id": "historical", - "grid_label": "gn", - "member_id": "r1i1p1f1", - "source_id": "CanESM5", - "reference_source_id": "WangMao", - "region": "tropical", - "statistic": "Regional mean" - } - }, "CanESM5_tropical_biasscore.png": { "filename": "CanESM5_tropical_biasscore.png", "long_name": "The bias score for CanESM5 over the Tropical climates region.", @@ -186,9 +172,9 @@ "statistic": "Bias score" } }, - "CanESM5_global_mean.png": { - "filename": "CanESM5_global_mean.png", - "long_name": "The period mean for CanESM5 over the Global - Land region.", + "CanESM5_global_rmse.png": { + "filename": "CanESM5_global_rmse.png", + "long_name": "The RMSE for CanESM5 over the Global - Land region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -197,7 +183,7 @@ "source_id": "CanESM5", "reference_source_id": "WangMao", "region": "global", - "statistic": "Period Mean" + "statistic": "RMSE" } }, "Reference_tropical_mean.png": { @@ -210,9 +196,23 @@ "source_id": "Reference" } }, - "None_global_taylor.png": { - "filename": "None_global_taylor.png", - "long_name": "The Taylor diagram over the Global - Land region.", + "CanESM5_tropical_mean.png": { + "filename": "CanESM5_tropical_mean.png", + "long_name": "The period mean for CanESM5 over the Tropical climates region.", + "description": "", + "dimensions": { + "experiment_id": "historical", + "grid_label": "gn", + "member_id": "r1i1p1f1", + "source_id": "CanESM5", + "reference_source_id": "WangMao", + "region": "tropical", + "statistic": "Period Mean" + } + }, + "CanESM5_global_biasscore.png": { + "filename": "CanESM5_global_biasscore.png", + "long_name": "The bias score for CanESM5 over the Global - Land region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -221,7 +221,7 @@ "source_id": "CanESM5", "reference_source_id": "WangMao", "region": "global", - "statistic": "Taylor diagram" + "statistic": "Bias score" } } }, diff --git a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/series.json b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/series.json index 6baa3e1e0..cd786fa60 100644 --- 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0.29506560116032143, + 0.29423521129590496, + 0.28988822007452497, + 0.2935115742414108, + 0.3002067385098174, + 0.3026038153908886, + 0.29904273421879085, + 0.29070293632373284, + 0.2870484014589769, + 0.2923022348829413, + 0.2983140316884264, + 0.2997474462551521, + 0.29394527927448105, + 0.28906232971166984, + 0.28938948602353265, + 0.2912022905361439, + 0.2927483691839875, + 0.297345934430481, + 0.2926177277149741, + 0.284486064252129 ] } ] \ No newline at end of file From 63add5a4b5d9abff6586056c37114cc0b6e0529e Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 17:04:27 +1000 Subject: [PATCH 07/22] fix(regression): sort series deterministically when writing series.json Diagnostics may emit their series in an implementation-defined order that differs across platforms (e.g. macOS vs the Linux CI runner). The regression baseline comparator walks JSON arrays positionally, so an unstable order made a committed bundle minted on one platform falsely fail the gate on another, even when every series value agreed within tolerance. Sort the series by their dimensions (with index_name as a tie-breaker) at the single serialisation point so the order is canonical everywhere. This makes local and CI mints interchangeable and keeps series.json diffs to value changes only. --- .../climate_ref_core/metric_values/typing.py | 12 ++++++- .../tests/unit/metric_values/test_typing.py | 32 +++++++++++++++++++ 2 files changed, 43 insertions(+), 1 deletion(-) diff --git a/packages/climate-ref-core/src/climate_ref_core/metric_values/typing.py b/packages/climate-ref-core/src/climate_ref_core/metric_values/typing.py index 34b8a9565..6d7194fcc 100644 --- a/packages/climate-ref-core/src/climate_ref_core/metric_values/typing.py +++ b/packages/climate-ref-core/src/climate_ref_core/metric_values/typing.py @@ -115,9 +115,19 @@ def dump_to_json(cls, path: Path, series: Sequence["SeriesMetricValue"]) -> None series The series values to dump. """ + # Sort the series by their dimensions before serialising so the order is + # deterministic across platforms and runs. Diagnostics may emit series in an + # implementation-defined order (e.g. set or dict iteration that differs by + # platform), which otherwise produces spurious diffs and breaks the positional + # regression comparator. ``dimensions`` uniquely identifies a series; ``index_name`` + # is a stable tie-breaker. + ordered = sorted( + series, + key=lambda s: (json.dumps(s.dimensions, sort_keys=True), s.index_name), + ) with open(path, "w") as f: json.dump( - [s.model_dump(mode="json") for s in series], + [s.model_dump(mode="json") for s in ordered], f, indent=2, allow_nan=False, diff --git a/packages/climate-ref-core/tests/unit/metric_values/test_typing.py b/packages/climate-ref-core/tests/unit/metric_values/test_typing.py index f91aae620..5b75472a3 100644 --- a/packages/climate-ref-core/tests/unit/metric_values/test_typing.py +++ b/packages/climate-ref-core/tests/unit/metric_values/test_typing.py @@ -1,3 +1,4 @@ +import json import re from pathlib import Path @@ -91,6 +92,37 @@ def test_dump_and_load_json(self, tmp_path: Path): assert loaded_series == series + def test_dump_orders_series_deterministically(self, tmp_path: Path): + # series.json must serialise in a stable, dimension-sorted order so the output + # does not depend on the (platform/run-dependent) order a diagnostic emitted its + # series in. The regression baseline comparator compares series positionally, so + # an unstable order would produce spurious cross-platform mismatches. + def make(model: str, region: str) -> SeriesMetricValue: + return SeriesMetricValue( + dimensions={"region": region, "source_id": model}, + values=[1.0, 2.0], + index=[0, 1], + index_name="time", + ) + + series = [make("CanESM5", "tropical"), make("Reference", "global"), make("CanESM5", "global")] + shuffled = [series[1], series[2], series[0]] + + path1 = tmp_path / "order1.json" + path2 = tmp_path / "order2.json" + SeriesMetricValue.dump_to_json(path1, series) + SeriesMetricValue.dump_to_json(path2, shuffled) + + # Byte-identical output regardless of the input ordering. + assert path1.read_text() == path2.read_text() + + # All series preserved and emitted in the canonical dimension-sorted order. + loaded = SeriesMetricValue.load_from_json(path1) + assert len(loaded) == len(series) + assert loaded == sorted( + loaded, key=lambda s: (json.dumps(s.dimensions, sort_keys=True), s.index_name) + ) + def test_load_from_json_not_a_list(self, tmp_path: Path): path = tmp_path / "test.json" path.write_text('{"not": "a list"}') From eca90338993f25ed7ab09eb29da79b8e82775f9b Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 17:04:54 +1000 Subject: [PATCH 08/22] docs(changelog): add fragment for deterministic series ordering --- changelog/738.fix.md | 1 + 1 file changed, 1 insertion(+) create mode 100644 changelog/738.fix.md diff --git a/changelog/738.fix.md b/changelog/738.fix.md new file mode 100644 index 000000000..342b0ccc2 --- /dev/null +++ b/changelog/738.fix.md @@ -0,0 +1 @@ +Regression `series.json` baselines are now written with a stable, dimension-sorted order. Previously a diagnostic could emit its series in a platform-dependent order, causing a committed bundle minted on one platform to falsely fail the regression gate on another even when every value matched within tolerance. From c2aa0b0b3e47469bd35cf9c1403324b19b41aad5 Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 18 Jun 2026 07:53:01 +0000 Subject: [PATCH 09/22] chore(regression): mint native baselines for ilamb --- .../tests/test-data/mrsos-wangmao/cmip6/manifest.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json index 765e3af7b..d1b5970a4 100644 --- a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json @@ -1,5 +1,5 @@ { - "catalog_hash": "025613ab823b9baff0783a2ff518d8a1256e0aba", + "catalog_hash": "7888051b7f9e6a15c0b8e562c1d97d8ab1cd1b73", "committed": { "diagnostic.json": "39fa24067750a57d1e0b8839b39834cc44b270f3b99f593b0ff6edf4777e0d06", "output.json": "44164117d217aeaceb70ff5304f30b7f4aa64328fa4ec06ca26cde516966fd5b", From 41b7c1db6df63e49e6336d1e24fff47d064a584a Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 17:59:40 +1000 Subject: [PATCH 10/22] ci(regression): rebase before pushing the mint commit-back --- .github/workflows/regression-mint.yaml | 19 ++++++++++++++++++- 1 file changed, 18 insertions(+), 1 deletion(-) diff --git a/.github/workflows/regression-mint.yaml b/.github/workflows/regression-mint.yaml index 8b8e67c8c..0b7be8590 100644 --- a/.github/workflows/regression-mint.yaml +++ b/.github/workflows/regression-mint.yaml @@ -128,4 +128,21 @@ jobs: # Pushed with GITHUB_TOKEN, so GitHub will NOT start new workflow runs for this # commit: the PR gate does not auto-replay the freshly minted baseline. Push a # follow-up commit (or re-run the PR gate) to verify it. See docs/background/regression-baselines.md. - git push origin "HEAD:${GITHUB_REF_NAME}" + # + # workflow_dispatch pins the checkout to the dispatch-time SHA, so the branch may + # have advanced (e.g. an earlier mint of another diagnostic landed). Rebase onto + # the latest remote tip before pushing and retry to absorb that race. Different + # diagnostics touch disjoint test-data paths, so the rebase does not conflict. + for attempt in 1 2 3 4 5; do + if git push origin "HEAD:${GITHUB_REF_NAME}"; then + exit 0 + fi + echo "push rejected (attempt ${attempt}); rebasing onto origin/${GITHUB_REF_NAME}" + git fetch origin "${GITHUB_REF_NAME}" + git rebase "origin/${GITHUB_REF_NAME}" || { + echo "::error::rebase conflict while committing regenerated baselines" + exit 1 + } + done + echo "::error::failed to push regenerated baselines after retries" + exit 1 From efd5ce553898ee9b5e75343673d5b7ae7cf5010f Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 18 Jun 2026 08:04:06 +0000 Subject: [PATCH 11/22] chore(regression): mint native baselines for ilamb --- .../test-data/lai-avh15c1/cmip6/manifest.json | 91 +- .../cmip6/regression/diagnostic.json | 24 +- .../lai-avh15c1/cmip6/regression/output.json | 144 +- .../lai-avh15c1/cmip6/regression/series.json | 3714 ++++++++--------- 4 files changed, 2027 insertions(+), 1946 deletions(-) diff --git a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json index 6491e7ffd..2285f87b4 100644 --- a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json @@ -1,11 +1,92 @@ { - "catalog_hash": "c35798dc9e7a8237a53c659d044e2e94c2daba99", + "catalog_hash": "e57ec82ce4308440a2b4e401ad25572488c00432", "committed": { - "diagnostic.json": "e6da1c10d4f3b95349fd296b61a853f3e641f25923292fd3d3d79a4a884037f9", - "output.json": "e24a97bbdf07178b4774a0ad1fe0ff4bcf7201d416d5c133cb24dd27002a3ee4", - "series.json": "228f579ff91a549c580f6884068ac9d32332d824683bb5b9c02ebcc17052078a" + "diagnostic.json": "d74d84b59311b888024d36da5e8eab1e7c3976d20e1b5dde53ba1cfda8686d42", + "output.json": 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"None_tropical_taylor.png": { + "filename": "None_tropical_taylor.png", + "long_name": "The Taylor diagram over the Tropical climates region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -33,12 +57,12 @@ "source_id": "CanESM5", "reference_source_id": "AVH15C1", "region": "tropical", - "statistic": "Bias" + "statistic": "Taylor diagram" } }, - "CanESM5_global_biasscore.png": { - "filename": "CanESM5_global_biasscore.png", - "long_name": "The bias score for CanESM5 over the Global - Land region.", + "CanESM5_tropical_trace.png": { + "filename": "CanESM5_tropical_trace.png", + "long_name": "The regional mean for CanESM5 over the Tropical climates region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -46,8 +70,8 @@ "member_id": "r1i1p1f1", "source_id": "CanESM5", "reference_source_id": "AVH15C1", - "region": "global", - "statistic": "Bias score" + "region": "tropical", + "statistic": "Regional mean" } }, "CanESM5_global_bias.png": { @@ 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<41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 18 Jun 2026 08:08:30 +0000 Subject: [PATCH 12/22] chore(regression): mint native baselines for ilamb --- .../gpp-fluxnet2015/cmip6/manifest.json | 89 +- .../cmip6/regression/diagnostic.json | 18 +- .../cmip6/regression/output.json | 144 +- .../cmip6/regression/series.json | 2918 ++++++++--------- 4 files changed, 1625 insertions(+), 1544 deletions(-) diff --git a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json index 2e985d960..efaa9c8e7 100644 --- a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json @@ -1,11 +1,92 @@ { "catalog_hash": "91e6801291efa5bde29cbe451e1246a2281992fe", "committed": { - "diagnostic.json": "9735917d6f3b31e68bdbc13593c7f65e5785e4c8ae630832d6535cb9fe6bcdca", - "output.json": 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for CanESM5 over the Tropical climates region.", @@ -22,9 +46,9 @@ "statistic": "RMSE" } }, - "CanESM5_tropical_bias.png": { - "filename": "CanESM5_tropical_bias.png", - "long_name": "The bias for CanESM5 over the Tropical climates region.", + "None_tropical_taylor.png": { + "filename": "None_tropical_taylor.png", + "long_name": "The Taylor diagram over the Tropical climates region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -33,12 +57,12 @@ "source_id": "CanESM5", "reference_source_id": "FLUXNET2015", "region": "tropical", - "statistic": "Bias" + "statistic": "Taylor diagram" } }, - "CanESM5_global_biasscore.png": { - "filename": "CanESM5_global_biasscore.png", - "long_name": "The bias score for CanESM5 over the Global - Land region.", + "CanESM5_tropical_trace.png": { + "filename": "CanESM5_tropical_trace.png", + "long_name": "The regional mean for CanESM5 over the Tropical climates region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -46,8 +70,8 @@ "member_id": "r1i1p1f1", "source_id": "CanESM5", "reference_source_id": "FLUXNET2015", - "region": "global", - "statistic": "Bias score" + "region": "tropical", + "statistic": "Regional mean" } }, "CanESM5_global_bias.png": { @@ -64,9 +88,9 @@ "statistic": "Bias" } }, - "CanESM5_global_rmsescore.png": { - "filename": "CanESM5_global_rmsescore.png", - "long_name": "The RMSE score for CanESM5 over the Global - Land region.", + "CanESM5_global_trace.png": { + "filename": "CanESM5_global_trace.png", + "long_name": "The regional mean for CanESM5 over the Global - Land region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -75,12 +99,12 @@ "source_id": "CanESM5", "reference_source_id": "FLUXNET2015", "region": "global", - "statistic": "RMSE score" + "statistic": "Regional mean" } }, - "CanESM5_global_rmse.png": { - "filename": "CanESM5_global_rmse.png", - "long_name": "The RMSE for CanESM5 over the Global - Land region.", + "CanESM5_tropical_bias.png": { + "filename": "CanESM5_tropical_bias.png", + "long_name": "The bias for CanESM5 over the Tropical climates region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -88,8 +112,8 @@ "member_id": "r1i1p1f1", "source_id": "CanESM5", "reference_source_id": "FLUXNET2015", - "region": "global", - "statistic": "RMSE" + "region": "tropical", + "statistic": "Bias" } }, "CanESM5_tropical_rmsescore.png": { @@ -106,33 +130,9 @@ "statistic": "RMSE score" } }, - "Reference_global_mean.png": { - "filename": "Reference_global_mean.png", - "long_name": "The period mean for the reference data over the Global - Land region.", - "description": "", - "dimensions": { - "region": "global", - "statistic": "Period Mean", - "source_id": "Reference" - } - }, - "None_tropical_taylor.png": { - "filename": "None_tropical_taylor.png", - "long_name": "The Taylor diagram over the Tropical climates region.", - "description": "", - "dimensions": { - "experiment_id": 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for CanESM5 over the Global - Land region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -154,24 +154,10 @@ "member_id": "r1i1p1f1", "source_id": "CanESM5", "reference_source_id": "FLUXNET2015", - "region": "tropical", + "region": "global", "statistic": "Period Mean" } }, - "CanESM5_tropical_trace.png": { - "filename": "CanESM5_tropical_trace.png", - "long_name": "The regional mean for CanESM5 over the Tropical climates region.", - "description": "", - "dimensions": { - "experiment_id": "historical", - "grid_label": "gn", - "member_id": "r1i1p1f1", - "source_id": "CanESM5", - "reference_source_id": "FLUXNET2015", - "region": "tropical", - "statistic": "Regional mean" - } - }, "CanESM5_tropical_biasscore.png": { "filename": "CanESM5_tropical_biasscore.png", "long_name": "The bias score for CanESM5 over the Tropical climates region.", @@ -186,9 +172,9 @@ "statistic": "Bias score" } }, - "CanESM5_global_mean.png": { - "filename": "CanESM5_global_mean.png", - "long_name": "The period mean for CanESM5 over the Global - Land region.", + "CanESM5_global_rmse.png": { + "filename": "CanESM5_global_rmse.png", + "long_name": "The RMSE for CanESM5 over the Global - Land region.", "description": "", "dimensions": { "experiment_id": "historical", @@ -197,7 +183,7 @@ "source_id": "CanESM5", "reference_source_id": "FLUXNET2015", "region": "global", - "statistic": "Period Mean" + "statistic": "RMSE" } }, "Reference_tropical_mean.png": { @@ -210,9 +196,23 @@ "source_id": "Reference" } }, - "None_global_taylor.png": { - "filename": "None_global_taylor.png", - "long_name": "The Taylor diagram over the Global - Land region.", + "CanESM5_tropical_mean.png": { + "filename": "CanESM5_tropical_mean.png", + "long_name": "The period mean for CanESM5 over the Tropical climates region.", + "description": "", + "dimensions": { + "experiment_id": "historical", + "grid_label": "gn", + "member_id": "r1i1p1f1", + "source_id": "CanESM5", + "reference_source_id": 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So those data files were never persisted with the results and were absent from the regression native baseline, leaving the committed bundle impossible to replay ("No objects to concatenate"). Register the *.csv and *.nc files in the output bundle's data section so the curated capture persists them and replay can reconstruct the execution. This is also a real persistence fix: the scientific scalar data was not being saved from production runs either. --- changelog/738.feature.md | 2 +- .../src/climate_ref_ilamb/standard.py | 25 +++++++++++++++++++ 2 files changed, 26 insertions(+), 1 deletion(-) diff --git a/changelog/738.feature.md b/changelog/738.feature.md index aac39c619..cb335dca5 100644 --- a/changelog/738.feature.md +++ b/changelog/738.feature.md @@ -1 +1 @@ -ILAMB regression baselines are migrated to the per-package Framework B layout, starting with the `mrsos-wangmao`, `gpp-fluxnet2015` and `lai-avh15c1` cmip6 test cases. Each carries a committed CMEC bundle and a manifest; native blobs are published separately through the gated mint workflow. +ILAMB regression baselines are migrated to the per-package Framework B layout, starting with the `mrsos-wangmao`, `gpp-fluxnet2015` and `lai-avh15c1` cmip6 test cases. Each carries a committed CMEC bundle and a manifest; native blobs are published separately through the gated mint workflow. ILAMB executions now also declare their scalar CSV and netCDF outputs in the CMEC output bundle so they are persisted with the results and can be replayed. diff --git a/packages/climate-ref-ilamb/src/climate_ref_ilamb/standard.py b/packages/climate-ref-ilamb/src/climate_ref_ilamb/standard.py index aad13a713..a771cfbdd 100644 --- a/packages/climate-ref-ilamb/src/climate_ref_ilamb/standard.py +++ b/packages/climate-ref-ilamb/src/climate_ref_ilamb/standard.py @@ -479,6 +479,26 @@ def _load_csv_and_merge(output_directory: Path) -> pd.DataFrame: return df +def _register_data_outputs(output_bundle: dict[str, Any], definition: ExecutionDefinition) -> None: + """ + Register ILAMB's scalar CSV and netCDF outputs in the data section of a CMEC output bundle. + + These files are re-read by ``build_execution_result`` (via ``_load_csv_and_merge`` and the + netCDF series loop) to reconstruct the metrics and series, so they must be persisted with the + execution outputs and captured in the regression baseline rather than left in the scratch + directory. + """ + for datafile in sorted( + [*definition.output_directory.glob("*.csv"), *definition.output_directory.glob("*.nc")] + ): + relative_path = str(definition.as_relative_path(datafile)) + output_bundle[OutputCV.DATA.value][relative_path] = { + OutputCV.FILENAME.value: relative_path, + OutputCV.LONG_NAME.value: datafile.name, + OutputCV.DESCRIPTION.value: "Scalar and time-series data produced by ILAMB.", + } + + class ILAMBStandard(Diagnostic): """ Apply the standard ILAMB analysis with respect to a given reference dataset. @@ -752,6 +772,11 @@ def build_execution_result(self, definition: ExecutionDefinition) -> ExecutionRe OutputCV.DIMENSIONS.value: figure_dimensions, } + # Register the scalar CSV files and the netCDF time-trace files in the data section so + # they are persisted with the execution outputs and captured in the regression baseline; + # build_execution_result re-reads them to reconstruct the metrics and series. + _register_data_outputs(output_bundle, definition) + # Add the html page to the output index_html = definition.to_output_path("index.html") if index_html.exists(): From cdc66f829d84b186f08fb64808de3d44d66e1f47 Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 18 Jun 2026 08:32:26 +0000 Subject: [PATCH 14/22] chore(regression): mint native baselines for ilamb --- .../mrsos-wangmao/cmip6/manifest.json | 20 ++++++++++++++---- .../cmip6/regression/output.json | 21 ++++++++++++++++++- 2 files changed, 36 insertions(+), 5 deletions(-) diff --git a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json index d1b5970a4..9d025d6be 100644 --- a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json @@ -1,11 +1,19 @@ { - "catalog_hash": "7888051b7f9e6a15c0b8e562c1d97d8ab1cd1b73", + "catalog_hash": "1844ea19317c10111398b17b36e5a146d8f8e84f", "committed": { "diagnostic.json": "39fa24067750a57d1e0b8839b39834cc44b270f3b99f593b0ff6edf4777e0d06", - "output.json": "44164117d217aeaceb70ff5304f30b7f4aa64328fa4ec06ca26cde516966fd5b", + "output.json": "c8ce172892ad687b787f08909deabb1a258845219ccb4fbf3ba31b7375f8b466", "series.json": "11b858547a550f8a013a08b5e93b563af36618bab0e9d967b4e689a2c12c743b" }, "native": { + "CanESM5.csv": { + "sha256": "96e1a7e1fd0007a4cb67f1a0cef77d93cb9376bcd30900f206038aa8ea55bfb5", + "size": 1355 + }, + "CanESM5.nc": { + "sha256": "f20da360186fbc007095ab4a567b5d0c84a1340a857ab2769271f49cfd0b8888", + "size": 13347043 + }, "CanESM5_global_bias.png": { "sha256": "be9ef2968c55ec1325acc2cca71f1b1d0ab884703fd55a83dda9f78c3e401116", "size": 29249 @@ -62,6 +70,10 @@ "sha256": "b8ab2dd32ad5f46b7079d46fc373e1bfcfebe36784311627ea4a32378c537fa6", "size": 101212 }, + "Reference.nc": { + "sha256": "6b9de471d6e9763adbc9cd97d4b35189155fc5c472d80da50b68a935a926dea7", + "size": 2105283 + }, "Reference_global_mean.png": { "sha256": "d76418a91f5cc98de3a52b304fdf91109828af8f1716906500de18e260bf6acf", "size": 22814 @@ -79,8 +91,8 @@ "size": 17258 }, "output.json": { - "sha256": "44164117d217aeaceb70ff5304f30b7f4aa64328fa4ec06ca26cde516966fd5b", - "size": 7740 + "sha256": "c8ce172892ad687b787f08909deabb1a258845219ccb4fbf3ba31b7375f8b466", + "size": 8315 }, "series.json": { "sha256": "11b858547a550f8a013a08b5e93b563af36618bab0e9d967b4e689a2c12c743b", diff --git a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/output.json b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/output.json index 042897208..d7d020fed 100644 --- a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/output.json +++ b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/regression/output.json @@ -6,7 +6,26 @@ "obsdata": {}, "log": "cmec_output.log" }, - "data": {}, + "data": { + "CanESM5.csv": { + "filename": "CanESM5.csv", + "long_name": "CanESM5.csv", + "description": "Scalar and time-series data produced by ILAMB.", + "dimensions": null + }, + "CanESM5.nc": { + "filename": "CanESM5.nc", + "long_name": "CanESM5.nc", + "description": "Scalar and time-series data produced by ILAMB.", + "dimensions": null + }, + "Reference.nc": { + "filename": "Reference.nc", + "long_name": "Reference.nc", + "description": "Scalar and time-series data produced by ILAMB.", + "dimensions": null + } + }, "plots": { "None_global_taylor.png": { "filename": "None_global_taylor.png", From 337798d5c7a637864e20007d894442c1a92fda75 Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 18 Jun 2026 08:36:18 +0000 Subject: [PATCH 15/22] chore(regression): mint native baselines for ilamb --- .../test-data/lai-avh15c1/cmip6/manifest.json | 20 ++++++++++++++---- .../lai-avh15c1/cmip6/regression/output.json | 21 ++++++++++++++++++- 2 files changed, 36 insertions(+), 5 deletions(-) diff --git a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json index 2285f87b4..1baa0003e 100644 --- a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json @@ -1,11 +1,19 @@ { - "catalog_hash": "e57ec82ce4308440a2b4e401ad25572488c00432", + "catalog_hash": "eaf1d92ad5f0af2bc54659a00868c4e5099cd1d4", "committed": { "diagnostic.json": "d74d84b59311b888024d36da5e8eab1e7c3976d20e1b5dde53ba1cfda8686d42", - "output.json": "01b368610207da5cddefc00a1d752f367a189dc461c2265933125723545fd55f", + "output.json": "8793e7b2b269d30d8fb0b84480405d7882a603d409db99b6cc3a4679b3ed3f8e", "series.json": "6a82911d1c4fbe7546e12f424fa2e325783e8fb60ee0d5296906e7732b96f92a" }, "native": { + "CanESM5.csv": { + "sha256": "f15a0bd5a7bcdc86112ac0c469c3f39a55bdf54b5b50b0dbc21149519408246b", + "size": 1345 + }, + "CanESM5.nc": { + "sha256": "a8743f5f22a21049c0a25ff54f138fe1560ca10c7a0aba9812c8b412dab945dc", + "size": 13332508 + }, "CanESM5_global_bias.png": { "sha256": "7248666c004f53aec70faded971ee74ad30d3cbc7c37b03072ed6c5ffb828765", "size": 34741 @@ -62,6 +70,10 @@ "sha256": "fa48b662d8750769dcd3fc5457bef924e9dc52bfdc4f4e7f2518f987c074cee1", "size": 101231 }, + "Reference.nc": { + "sha256": "c452a8e3c23a408e232dfc7b2a5d8c00021dc58deb1294aafdc1438e64c9ea15", + "size": 2111912 + }, "Reference_global_mean.png": { "sha256": "8cdc9524891618143e4c17e282a64a1640d19cd0f79baab4165876a5e473ddc8", "size": 36901 @@ -79,8 +91,8 @@ "size": 17244 }, "output.json": { - "sha256": "01b368610207da5cddefc00a1d752f367a189dc461c2265933125723545fd55f", - "size": 7740 + "sha256": "8793e7b2b269d30d8fb0b84480405d7882a603d409db99b6cc3a4679b3ed3f8e", + "size": 8315 }, "series.json": { "sha256": "6a82911d1c4fbe7546e12f424fa2e325783e8fb60ee0d5296906e7732b96f92a", diff --git a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/regression/output.json b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/regression/output.json index 1f3db300e..32acc738c 100644 --- a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/regression/output.json +++ b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/regression/output.json @@ -6,7 +6,26 @@ "obsdata": {}, "log": "cmec_output.log" }, - "data": {}, + "data": { + "CanESM5.csv": { + "filename": "CanESM5.csv", + "long_name": "CanESM5.csv", + "description": "Scalar and time-series data produced by ILAMB.", + "dimensions": null + }, + "CanESM5.nc": { + "filename": "CanESM5.nc", + "long_name": "CanESM5.nc", + "description": "Scalar and time-series data produced by ILAMB.", + "dimensions": null + }, + "Reference.nc": { + "filename": "Reference.nc", + "long_name": "Reference.nc", + "description": "Scalar and time-series data produced by ILAMB.", + "dimensions": null + } + }, "plots": { "None_global_taylor.png": { "filename": "None_global_taylor.png", From e06ea60667a316e174234f43b294ef168aa996aa Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 18 Jun 2026 08:40:39 +0000 Subject: [PATCH 16/22] chore(regression): mint native baselines for ilamb --- .../gpp-fluxnet2015/cmip6/manifest.json | 20 ++++++++++++++---- .../cmip6/regression/output.json | 21 ++++++++++++++++++- 2 files changed, 36 insertions(+), 5 deletions(-) diff --git a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json index efaa9c8e7..d1aad572c 100644 --- a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json @@ -1,11 +1,19 @@ { - "catalog_hash": "91e6801291efa5bde29cbe451e1246a2281992fe", + "catalog_hash": "0c8a101fb5302de2b9b711bfa6a4ab97a59edcfe", "committed": { "diagnostic.json": "ecfa5a538e3e9c4d3c5b8e24a3b700dd409e0f316ce18e5aad829cd7aabc01a2", - "output.json": "bcb6ba132bf4d6e005f3c34065292c7214d521e5050852fc6cc258fe7845f97c", + "output.json": "9ece087f05764db9efde417d5e04c5c4d8cebdb8fe6c3a61367e94f0385f86cc", "series.json": "04b331fae87a1b2f5da0ff2b74dced91c704552b3c76d3b57b459e68f216b9b6" }, "native": { + "CanESM5.csv": { + "sha256": "c2d358e71ee3581849e9ad640669b58c20952fcb0fd2853a1b79b5b1929487a1", + "size": 1473 + }, + "CanESM5.nc": { + "sha256": "4e6d4bc3a9e67010de846be24d0ed40f8a99c4a60c6f39ba7d6a9b90ef90302c", + "size": 72045 + }, "CanESM5_global_bias.png": { "sha256": "d55364f7dcca9af8e8c6924b4b20d4570059496c9271707f9f99507e484d7729", "size": 30396 @@ -62,6 +70,10 @@ "sha256": "3ff92367f51c17d83e45be6841ba6fc17d68bfa98e10cc8546fe4da6a5b3954d", "size": 101111 }, + "Reference.nc": { + "sha256": "fbd436f6d57e1db7ea1fea8c751998d2d4a2dae44913de136017761f2629f464", + "size": 37442 + }, "Reference_global_mean.png": { "sha256": "1c01068ab146d44c5a7a78d3e6e9c39e9808f9bd54b44ee3e9b81f285af387d0", "size": 29959 @@ -79,8 +91,8 @@ "size": 17192 }, "output.json": { - "sha256": "bcb6ba132bf4d6e005f3c34065292c7214d521e5050852fc6cc258fe7845f97c", - "size": 7800 + "sha256": "9ece087f05764db9efde417d5e04c5c4d8cebdb8fe6c3a61367e94f0385f86cc", + "size": 8375 }, "series.json": { "sha256": "04b331fae87a1b2f5da0ff2b74dced91c704552b3c76d3b57b459e68f216b9b6", diff --git a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/regression/output.json b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/regression/output.json index 089ec0432..6ac2164ce 100644 --- a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/regression/output.json +++ b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/regression/output.json @@ -6,7 +6,26 @@ "obsdata": {}, "log": "cmec_output.log" }, - "data": {}, + "data": { + "CanESM5.csv": { + "filename": "CanESM5.csv", + "long_name": "CanESM5.csv", + "description": "Scalar and time-series data produced by ILAMB.", + "dimensions": null + }, + "CanESM5.nc": { + "filename": "CanESM5.nc", + "long_name": "CanESM5.nc", + "description": "Scalar and time-series data produced by ILAMB.", + "dimensions": null + }, + "Reference.nc": { + "filename": "Reference.nc", + "long_name": "Reference.nc", + "description": "Scalar and time-series data produced by ILAMB.", + "dimensions": null + } + }, "plots": { "None_global_taylor.png": { "filename": "None_global_taylor.png", From 56d3ca925153bc132cc77fcf015b97a44ead489f Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 20:17:38 +1000 Subject: [PATCH 17/22] fix(regression): align ilamb cmip6 catalog hashes with minted manifests The committed catalog.yaml _metadata.hash for gpp-fluxnet2015, lai-avh15c1 and mrsos-wangmao no longer matched the catalog_hash recorded in each manifest.json, so the PR coupling gate failed with "input catalog.yaml does not match manifest.json catalog_hash". datasets.hash is not reproducible across pandas versions: the latest mint recomputed a different hash into the manifest, while the committed catalog kept the developer-authored value. Re-point each catalog to its manifest's hash, the value tied to the baseline that was actually minted. --- .../tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml | 2 +- .../tests/test-data/lai-avh15c1/cmip6/catalog.yaml | 2 +- .../tests/test-data/mrsos-wangmao/cmip6/catalog.yaml | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml index 677811580..69103b2c0 100644 --- a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml +++ b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml @@ -1,5 +1,5 @@ _metadata: - hash: 91e6801291efa5bde29cbe451e1246a2281992fe + hash: 0c8a101fb5302de2b9b711bfa6a4ab97a59edcfe cmip6: slug_column: instance_id selector: diff --git a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/catalog.yaml b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/catalog.yaml index 5b6cb7f6c..73332f02a 100644 --- a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/catalog.yaml +++ b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/catalog.yaml @@ -1,5 +1,5 @@ _metadata: - hash: c35798dc9e7a8237a53c659d044e2e94c2daba99 + hash: eaf1d92ad5f0af2bc54659a00868c4e5099cd1d4 cmip6: slug_column: instance_id selector: diff --git a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/catalog.yaml b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/catalog.yaml index 07195077d..aea751012 100644 --- a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/catalog.yaml +++ b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/catalog.yaml @@ -1,5 +1,5 @@ _metadata: - hash: 025613ab823b9baff0783a2ff518d8a1256e0aba + hash: 1844ea19317c10111398b17b36e5a146d8f8e84f cmip6: slug_column: instance_id selector: From 6f32edd75f76096ed56ad768a646b91c34648cd1 Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 20:18:02 +1000 Subject: [PATCH 18/22] ci(regression): commit regenerated catalog.yaml during mint The mint commit step staged manifest.json and regression/** but not catalog.yaml. datasets.hash (catalog.yaml's _metadata.hash, recorded as the manifest's catalog_hash) is not reproducible across pandas versions, so the runner regenerated catalog.yaml with a new hash and wrote it into the committed manifest, but discarded the regenerated catalog. The committed manifest and catalog then disagreed, breaking the PR coupling gate. Stage catalog.yaml alongside the manifest so they cannot drift apart on future mints. --- .github/workflows/regression-mint.yaml | 13 +++++++------ 1 file changed, 7 insertions(+), 6 deletions(-) diff --git a/.github/workflows/regression-mint.yaml b/.github/workflows/regression-mint.yaml index 0b7be8590..4903ba1f8 100644 --- a/.github/workflows/regression-mint.yaml +++ b/.github/workflows/regression-mint.yaml @@ -116,9 +116,12 @@ jobs: git config user.name "github-actions[bot]" git config user.email "41898282+github-actions[bot]@users.noreply.github.com" - # Stage only the committed bundle and manifest; native blobs live in the - # object store, not the tree, and nothing else should change during a mint. + # Stage the committed bundle, its manifest, and the input catalog. + # The catalog.yaml is included because the mint regenerates it: + # datasets.hash (its _metadata.hash, recorded as the manifest's catalog_hash) is not reproducible across pandas versions, + # so the runner's value can differ from the developer-authored one. git add ':(glob)packages/**/test-data/**/manifest.json' \ + ':(glob)packages/**/test-data/**/catalog.yaml' \ ':(glob)packages/**/test-data/**/regression/**' if git diff --cached --quiet; then echo "No baseline changes to commit; the native blobs were already current." @@ -129,10 +132,8 @@ jobs: # commit: the PR gate does not auto-replay the freshly minted baseline. Push a # follow-up commit (or re-run the PR gate) to verify it. See docs/background/regression-baselines.md. # - # workflow_dispatch pins the checkout to the dispatch-time SHA, so the branch may - # have advanced (e.g. an earlier mint of another diagnostic landed). Rebase onto - # the latest remote tip before pushing and retry to absorb that race. Different - # diagnostics touch disjoint test-data paths, so the rebase does not conflict. + # The branch may have advanced (e.g. mint of another diagnostic). + # Different diagnostics touch disjoint test-data paths, so the rebase does not conflict. for attempt in 1 2 3 4 5; do if git push origin "HEAD:${GITHUB_REF_NAME}"; then exit 0 From 06409e252aff7c54a296a25aa3e31ed40025e980 Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 20:22:26 +1000 Subject: [PATCH 19/22] ci(regression): run mint and drift on self-hosted ARC runners Switch the mint and nightly-drift workflows from ubuntu-latest to the self-hosted arc-climate-ref runners, which mount the persistent dataset, software and intake-esgf caches. Set TQDM_DISABLE so the cache-warming downloads do not flood the logs. The drift job runs only on schedule/workflow_dispatch and stays guarded by the repository check, so moving it to self-hosted infra does not expose the runners to untrusted fork pull-request code. --- .github/workflows/regression-drift.yaml | 9 ++++++--- .github/workflows/regression-mint.yaml | 8 +++++++- 2 files changed, 13 insertions(+), 4 deletions(-) diff --git a/.github/workflows/regression-drift.yaml b/.github/workflows/regression-drift.yaml index 7ae1d6aba..9d4620264 100644 --- a/.github/workflows/regression-drift.yaml +++ b/.github/workflows/regression-drift.yaml @@ -4,8 +4,8 @@ # catching baselines that no longer reproduce within tolerance (e.g. after a dependency upgrade) # even when no pull request touched them. # -# Run on the public runners with no credentials (read-only access to the public repository and public read access to the native blobs), -# so it is safe on untrusted fork pull-request code. +# Runs on the self-hosted ARC runners to reuse the persistent dataset and intake-esgf caches +# (REF_DATASET_CACHE_DIR=/data/cache/datasets, ~/.esgf and the read-only /data/cmip6 archive). # A failure here means a stored baseline has drifted and needs investigation (and possibly a re-mint). # See docs/background/regression-baselines.md. name: Regression baselines (nightly drift) @@ -28,7 +28,10 @@ jobs: drift: # Don't run the scheduled check on forks. if: github.repository == 'Climate-REF/climate-ref' - runs-on: ubuntu-latest + runs-on: "arc-climate-ref" + env: + # Avoid the huge amounts of TQDM output from the download + TQDM_DISABLE: "1" strategy: # A drift in one provider must not cancel the others' checks. fail-fast: false diff --git a/.github/workflows/regression-mint.yaml b/.github/workflows/regression-mint.yaml index 4903ba1f8..132fde235 100644 --- a/.github/workflows/regression-mint.yaml +++ b/.github/workflows/regression-mint.yaml @@ -47,11 +47,17 @@ concurrency: jobs: mint: if: github.repository == 'Climate-REF/climate-ref' - runs-on: ubuntu-latest + # Run on the self-hosted ARC runners. + # They mount the persistent dataset, software, and intake-esgf caches. + # This requires approval by a maintainer to be run. + runs-on: "arc-climate-ref" environment: native-baselines defaults: run: shell: bash + env: + # Keep the cache-warming download steps from flooding the log with progress bars. + TQDM_DISABLE: "1" steps: - name: Refuse to mint on the default branch if: github.ref_name == github.event.repository.default_branch From bde86923c4afd876d0244d12351aa019bb5f3ce4 Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 21:28:07 +1000 Subject: [PATCH 20/22] ci(regression): speed up the PR gate by dropping the unused input fetch The PR-tier regression gate replays only the cases a pull request touches, and replay rebuilds the committed bundle from the native output blobs plus the committed catalog/manifest -- `build_execution_result` never reads the input datasets. The gate was nonetheless fetching the full CMIP sample data and every provider's ESGF inputs before replaying, which dominated the job runtime (tens of minutes) for no benefit. Remove the `fetch-sample-data` and `test-cases fetch` block from the gate so it only pays for the small native blobs of the cases it actually replays. Also make the gate script runnable locally: it emits GitHub Actions log groups and annotations only under Actions, prints plain output otherwise, and accepts an optional base ref (defaulting to origin/${GITHUB_BASE_REF:-main}). A `make regression-gate` target is the convenient entry point. Update the regression-baselines reference and the testing-diagnostics how-to to document the no-input-data behaviour and the local entry point. --- .github/workflows/regression-pr-gate.yaml | 2 - Makefile | 4 ++ docs/background/regression-baselines.md | 19 ++++++ docs/how-to-guides/testing-diagnostics.md | 3 + scripts/ci/regression-pr-gate.sh | 72 +++++++++++++---------- 5 files changed, 67 insertions(+), 33 deletions(-) diff --git a/.github/workflows/regression-pr-gate.yaml b/.github/workflows/regression-pr-gate.yaml index aaabc696a..7753afcf6 100644 --- a/.github/workflows/regression-pr-gate.yaml +++ b/.github/workflows/regression-pr-gate.yaml @@ -40,8 +40,6 @@ jobs: with: python-version: "3.13" - name: Decide and verify baselines - # The gate fetches sample data only when a case actually needs replaying, - # so a PR that touches no baselines completes without any downloads. env: GITHUB_BASE_REF: ${{ github.base_ref }} run: bash scripts/ci/regression-pr-gate.sh diff --git a/Makefile b/Makefile index 92cb538ba..4967595f9 100644 --- a/Makefile +++ b/Makefile @@ -145,6 +145,10 @@ test-diagnostics: test-diagnostic-example test-diagnostic-esmvaltool test-diagno .PHONY: test-executors test-executors: test-celery +.PHONY: regression-gate +regression-gate: ## run the regression baseline coupling gate + replay (compares against origin/main) + bash scripts/ci/regression-pr-gate.sh + .PHONY: test test: clean test-core test-ref test-executors test-diagnostics test-integration ## run the tests uv run coverage report diff --git a/docs/background/regression-baselines.md b/docs/background/regression-baselines.md index 3ebc24ff7..7ab059b5c 100644 --- a/docs/background/regression-baselines.md +++ b/docs/background/regression-baselines.md @@ -182,6 +182,25 @@ branch and acts on each decision: The job runs on the public `ubuntu-latest` runner with no secrets, so it is safe on fork pull requests. The decision-to-replay fan-out lives in `scripts/ci/regression-pr-gate.sh`. +Neither stage downloads input datasets: +`ci-gate` reads only manifests and the git diff, +and `replay` rebuilds the committed bundle from the public native blobs plus the committed `catalog.yaml`/`manifest.json` +(`build_execution_result` reads only its output directory). +The gate therefore fetches no sample data or ESGF inputs — only the small native blobs for the cases it actually replays. + +#### Running the gate locally + +The same script is the local entry point, so you can reproduce a pull request's verdict before pushing: + +```bash +make regression-gate # gate + replay against origin/main +bash scripts/ci/regression-pr-gate.sh main # or pass any base ref +``` + +The base ref defaults to `origin/${GITHUB_BASE_REF:-main}`. +Under GitHub Actions the script emits log groups and `::error::`/`::warning::` annotations; +run locally it prints plain output instead. + ### Gated mint (`regression-mint.yaml`) Minting is the only step that writes to the object store, diff --git a/docs/how-to-guides/testing-diagnostics.md b/docs/how-to-guides/testing-diagnostics.md index 6b5fdbb4b..5b758f9b9 100644 --- a/docs/how-to-guides/testing-diagnostics.md +++ b/docs/how-to-guides/testing-diagnostics.md @@ -460,6 +460,9 @@ flowchart TD Bump `test_case_version` whenever you *intend* to change a baseline — it tells reviewers and CI the new output is correct. +!!! tip "Check the gate locally before pushing" + Run the same gate your pull request will hit with `make regression-gate` (it compares against `origin/main`). + #### Publishing a native baseline Native files are written to the object store only by `ref test-case mint`, which needs write credentials. diff --git a/scripts/ci/regression-pr-gate.sh b/scripts/ci/regression-pr-gate.sh index 8fb89716e..bb59fd2c3 100755 --- a/scripts/ci/regression-pr-gate.sh +++ b/scripts/ci/regression-pr-gate.sh @@ -2,26 +2,46 @@ # PR-tier regression baseline gate. # # Runs the coupling gate (`ref test-cases ci-gate`) against the pull request's base branch and, -# for every case it routes to `replay`, re-checks the cached native baseline. +# for every case it routes to `replay`, re-checks the committed native baseline. # -# All baseline data can be fetched with public read access so this does not require credentials. +# Neither stage needs input data. +# `replay` rebuilds the committed bundle from native output blobs pulled from the public +# store (plus the committed catalog/manifest). # -# `ci-gate` reads only manifests and the git diff, so it needs no input data. -# The (slower) sample-data and catalog fetch is therefore deferred until the gate has found at least one case that actually needs replaying. -# The common pull request touches no baselines and skips the download entirely. +# Usage: +# make regression-gate # the convenient local entry point +# bash scripts/ci/regression-pr-gate.sh [base] # or call directly, optionally overriding the base ref # -# Environment: +# base ref to diff against. Defaults to origin/${GITHUB_BASE_REF:-main}. # GITHUB_BASE_REF the PR's base branch (set automatically on pull_request events). +# +# Running under GitHub Actions emits log groups and ::error::/::warning:: annotations; +# locally it prints plain, readable output instead. +# Run it before pushing to catch a coupling violation or replay drift without waiting for CI. set -euo pipefail -# Rich colour codes would corrupt the JSON we parse with jq. Force them off here so the -# script is self-contained and parseable even when run outside the workflow (which also -# sets NO_COLOR for the same reason). +# Rich colour codes would corrupt the JSON we parse with jq export NO_COLOR=1 -base="origin/${GITHUB_BASE_REF:-main}" +# GitHub Actions log-grouping and annotation commands are just noise on a local terminal, +# so emit them only under Actions and print readable equivalents otherwise. +if [ -n "${GITHUB_ACTIONS:-}" ]; then + begin_group() { echo "::group::$*"; } + end_group() { echo "::endgroup::"; } + error() { echo "::error::$*"; } + warning() { echo "::warning::$*"; } +else + begin_group() { printf '\n==> %s\n' "$*"; } + end_group() { :; } + error() { printf 'ERROR: %s\n' "$*" >&2; } + warning() { printf 'WARNING: %s\n' "$*" >&2; } +fi + +# CI passes the base via GITHUB_BASE_REF (and fetches origin/ beforehand); locally, +# pass one as the first argument or rely on the origin/main default. +base="${1:-origin/${GITHUB_BASE_REF:-main}}" -echo "::group::coupling gate (base: ${base})" +begin_group "coupling gate (base: ${base})" # `ci-gate` exits non-zero when any case is gated `fail`; capture the decisions # regardless so the failing cases can be reported before the script exits. set +e @@ -29,19 +49,19 @@ decisions="$(uv run ref test-cases ci-gate --base "${base}" --json)" gate_rc=$? set -e printf '%s\n' "${decisions}" | jq . -echo "::endgroup::" +end_group if [ "${gate_rc}" -ne 0 ]; then - # `ci-gate` exits non-zero for two distinct reasons: at least one case was gated - # `fail`, or a hard error (not a git repo, an unfetched base ref, a failed diff) + # `ci-gate` exits non-zero for two distinct reasons: at least one case was gated `fail`, + # or a hard error (not a git repo, an unfetched base ref, a failed diff) # that printed no decisions. Only the former is a baseline-coupling violation, so # report each kind accurately rather than blaming every failure on the author. fail_cases="$(printf '%s\n' "${decisions}" | jq -r '.[]? | select(.action == "fail") | " FAIL " + .case + " -- " + .reason')" if [ -n "${fail_cases}" ]; then - echo "::error::Coupling gate failed -- a baseline changed without an authorised test_case_version bump." + error "Coupling gate failed -- a baseline changed without an authorised test_case_version bump." echo "${fail_cases}" else - echo "::error::ci-gate exited ${gate_rc} without a fail decision -- see the gate output above (e.g. an unfetched base ref or a non-git checkout)." + error "ci-gate exited ${gate_rc} without a fail decision -- see the gate output above (e.g. an unfetched base ref or a non-git checkout)." fi exit 1 fi @@ -49,7 +69,7 @@ fi while IFS= read -r execute_case; do [ -n "${execute_case}" ] || continue - echo "::warning::${execute_case} bumped test_case_version with no native baseline -- review the committed bundle, then mint on the trusted tier to enable replay verification." + warning "${execute_case} bumped test_case_version with no native baseline -- review the committed bundle, then mint on the trusted tier to enable replay verification." done < <(printf '%s\n' "${decisions}" | jq -r '.[] | select(.action == "execute") | .case') replay_cases="$(printf '%s\n' "${decisions}" | jq -r '.[] | select(.action == "replay") | .case')" @@ -58,33 +78,23 @@ if [ -z "${replay_cases}" ]; then exit 0 fi -# Only now -- with replay work to do -- pay for the input data the replay needs. -echo "::group::fetch inputs for replay" -uv run ref datasets fetch-sample-data -while IFS= read -r provider; do - [ -n "${provider}" ] || continue - uv run ref test-cases fetch --provider "${provider}" \ - || echo "::warning::test-case fetch incomplete for ${provider}" -done < <(printf '%s\n' "${replay_cases}" | cut -d/ -f1 | sort -u) -echo "::endgroup::" -# Replay every case the gate routed to REPLAY. Process substitution (rather than a -# pipe) keeps the loop in the current shell so the failure counter survives. +# Replay every case the gate routed to REPLAY. failures=0 replayed=0 while IFS='/' read -r provider diagnostic test_case; do [ -n "${provider}" ] || continue - echo "::group::replay ${provider}/${diagnostic}/${test_case}" + begin_group "replay ${provider}/${diagnostic}/${test_case}" if uv run ref test-cases replay \ --provider "${provider}" \ --diagnostic "${diagnostic}" \ --test-case "${test_case}"; then replayed=$((replayed + 1)) else - echo "::error::replay drift for ${provider}/${diagnostic}/${test_case}" + error "replay drift for ${provider}/${diagnostic}/${test_case}" failures=$((failures + 1)) fi - echo "::endgroup::" + end_group done < <(printf '%s\n' "${replay_cases}") echo "Replayed ${replayed} case(s); ${failures} drifted." From 5fe80f545f5294db6e79bcbedd0eb67c59236003 Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 21:29:01 +1000 Subject: [PATCH 21/22] docs(changelog): add fragment for PR #742 --- changelog/742.trivial.md | 1 + 1 file changed, 1 insertion(+) create mode 100644 changelog/742.trivial.md diff --git a/changelog/742.trivial.md b/changelog/742.trivial.md new file mode 100644 index 000000000..97da19a46 --- /dev/null +++ b/changelog/742.trivial.md @@ -0,0 +1 @@ +Sped up the per-pull-request regression baseline gate by no longer downloading the input data that replay never reads, and made the gate runnable locally via `make regression-gate`. From f7de8b17d09a66d086518f966713dd16cb3b24ea Mon Sep 17 00:00:00 2001 From: Jared Lewis Date: Thu, 18 Jun 2026 21:30:54 +1000 Subject: [PATCH 22/22] fix(regression): rehash ilamb cmip6 catalogs after deterministic-hash merge PR #741 (merged into main) changed datasets.hash to a pandas-version-independent algorithm. Recompute the catalog_hash for the gpp-fluxnet2015, lai-avh15c1 and mrsos-wangmao cmip6 baselines with the new algorithm so each catalog.yaml _metadata.hash matches its manifest.json catalog_hash and the recomputed value, keeping the coupling gate green now that the algorithm has changed. --- .../tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml | 2 +- .../tests/test-data/gpp-fluxnet2015/cmip6/manifest.json | 2 +- .../tests/test-data/lai-avh15c1/cmip6/catalog.yaml | 2 +- .../tests/test-data/lai-avh15c1/cmip6/manifest.json | 2 +- .../tests/test-data/mrsos-wangmao/cmip6/catalog.yaml | 2 +- .../tests/test-data/mrsos-wangmao/cmip6/manifest.json | 2 +- 6 files changed, 6 insertions(+), 6 deletions(-) diff --git a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml index 69103b2c0..eec9eefe9 100644 --- a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml +++ b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/catalog.yaml @@ -1,5 +1,5 @@ _metadata: - hash: 0c8a101fb5302de2b9b711bfa6a4ab97a59edcfe + hash: 335fbe7c1dd5312b91d96e20499c8e4461ff664f cmip6: slug_column: instance_id selector: diff --git a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json index d1aad572c..bfbff90ec 100644 --- a/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/gpp-fluxnet2015/cmip6/manifest.json @@ -1,5 +1,5 @@ { - "catalog_hash": "0c8a101fb5302de2b9b711bfa6a4ab97a59edcfe", + "catalog_hash": "335fbe7c1dd5312b91d96e20499c8e4461ff664f", "committed": { "diagnostic.json": "ecfa5a538e3e9c4d3c5b8e24a3b700dd409e0f316ce18e5aad829cd7aabc01a2", "output.json": "9ece087f05764db9efde417d5e04c5c4d8cebdb8fe6c3a61367e94f0385f86cc", diff --git a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/catalog.yaml b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/catalog.yaml index 73332f02a..2d0dbec22 100644 --- a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/catalog.yaml +++ b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/catalog.yaml @@ -1,5 +1,5 @@ _metadata: - hash: eaf1d92ad5f0af2bc54659a00868c4e5099cd1d4 + hash: a1a7ccaa50f6dabc83709bc82562df7ed99c5d9c cmip6: slug_column: instance_id selector: diff --git a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json index 1baa0003e..59775a20c 100644 --- a/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/lai-avh15c1/cmip6/manifest.json @@ -1,5 +1,5 @@ { - "catalog_hash": "eaf1d92ad5f0af2bc54659a00868c4e5099cd1d4", + "catalog_hash": "a1a7ccaa50f6dabc83709bc82562df7ed99c5d9c", "committed": { "diagnostic.json": "d74d84b59311b888024d36da5e8eab1e7c3976d20e1b5dde53ba1cfda8686d42", "output.json": "8793e7b2b269d30d8fb0b84480405d7882a603d409db99b6cc3a4679b3ed3f8e", diff --git a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/catalog.yaml b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/catalog.yaml index aea751012..720d1a36a 100644 --- a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/catalog.yaml +++ b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/catalog.yaml @@ -1,5 +1,5 @@ _metadata: - hash: 1844ea19317c10111398b17b36e5a146d8f8e84f + hash: abae4385704e26ebc1936adbe0d6b0402d2ce0a1 cmip6: slug_column: instance_id selector: diff --git a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json index 9d025d6be..fe7c3ac69 100644 --- a/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json +++ b/packages/climate-ref-ilamb/tests/test-data/mrsos-wangmao/cmip6/manifest.json @@ -1,5 +1,5 @@ { - "catalog_hash": "1844ea19317c10111398b17b36e5a146d8f8e84f", + "catalog_hash": "abae4385704e26ebc1936adbe0d6b0402d2ce0a1", "committed": { "diagnostic.json": "39fa24067750a57d1e0b8839b39834cc44b270f3b99f593b0ff6edf4777e0d06", "output.json": "c8ce172892ad687b787f08909deabb1a258845219ccb4fbf3ba31b7375f8b466",