Automation-Scripts/requirements.txt at main · ChronicallyAcute/Automation-Scripts · GitHub

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align==0.1.1
anyio==4.12.1
asttokens==3.0.1
backends==1.8.0
beartype==0.22.9
beautifulsoup4==4.14.3
bio==1.8.1
biopython==1.86
biothings_client==0.4.1
certifi==2026.1.4
charset-normalizer==3.4.4
click==8.3.1
colorama==0.4.6
decorator==5.2.1
et_xmlfile==2.0.0
executing==2.2.1
gensim==4.4.0
gprofiler-official==1.0.0
h11==0.16.0
httpcore==1.0.9
httpx==0.28.1
idna==3.11
ipython==9.9.0
ipython_pygments_lexers==1.1.1
jedi==0.19.2
joblib==1.5.3
markdown-it-py==4.0.0
matplotlib-inline==0.2.1
mdurl==0.1.2
muscle==0.0.4
mygene==3.2.2
nltk==3.9.2
numpy==2.4.1
openpyxl==3.1.5
opt_einsum==3.4.0
packaging==26.0
pairwise-sequence-alignment==1.0.3
pandas==3.0.0
parso==0.8.5
platformdirs==4.5.1
plum-dispatch==2.6.1
pooch==1.8.2
prompt_toolkit==3.0.52
psa==0.1.0
pure_eval==0.2.3
Pygments==2.19.2
PyQt5==5.15.11
PyQt5-Qt5==5.15.2
PyQt5_sip==12.18.0
python-dateutil==2.9.0.post0
regex==2026.1.15
requests==2.32.5
rich==14.3.1
scipy==1.17.0
six==1.17.0
smart_open==7.5.0
soupsieve==2.8.3
stack-data==0.6.3
tk==0.1.0
tqdm==4.67.1
traitlets==5.14.3
typing_extensions==4.15.0
tzdata==2025.3
urllib3==2.6.3
wcwidth==0.5.2
wrapt==2.0.1